Gene : OTP85 A. thaliana TAIR10
Primary Identifier:  ? AT2G02980 Defline:  (1 of 61) PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase)
Genomic Order:  196 Name:  ? AT2G02980
Secondary Identifier:  ? PAC:19642154
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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G02980 0.5kb upstream 0.5kb upstream 2527 true Chr2: 867859-870385 Arabidopsis thaliana
AT2G02980 0.5kb upstream 0.5kb upstream 500 false Chr2: 867859-868358 Arabidopsis thaliana
AT2G02980 0.5kb downstream 0.5kb downstream 2527 true Chr2: 868359-870885 Arabidopsis thaliana
AT2G02980 0.5kb downstream 0.5kb downstream 500 false Chr2: 870386-870885 Arabidopsis thaliana
AT2G02980 1.0kb upstream 1.0kb upstream 3027 true Chr2: 867359-870385 Arabidopsis thaliana
AT2G02980 1.0kb upstream 1.0kb upstream 1000 false Chr2: 867359-868358 Arabidopsis thaliana
AT2G02980 1.0kb downstream 1.0kb downstream 3027 true Chr2: 868359-871385 Arabidopsis thaliana
AT2G02980 1.0kb downstream 1.0kb downstream 1000 false Chr2: 870386-871385 Arabidopsis thaliana
AT2G02980 2.0kb upstream 2.0kb upstream 4027 true Chr2: 866359-870385 Arabidopsis thaliana
AT2G02980 2.0kb upstream 2.0kb upstream 2000 false Chr2: 866359-868358 Arabidopsis thaliana
AT2G02980 2.0kb downstream 2.0kb downstream 4027 true Chr2: 868359-872385 Arabidopsis thaliana
AT2G02980 2.0kb downstream 2.0kb downstream 2000 false Chr2: 870386-872385 Arabidopsis thaliana
AT2G02980 5.0kb upstream 5.0kb upstream 7027 true Chr2: 863359-870385 Arabidopsis thaliana
AT2G02980 5.0kb upstream 5.0kb upstream 5000 false Chr2: 863359-868358 Arabidopsis thaliana
AT2G02980 5.0kb downstream 5.0kb downstream 7027 true Chr2: 868359-875385 Arabidopsis thaliana
AT2G02980 5.0kb downstream 5.0kb downstream 5000 false Chr2: 870386-875385 Arabidopsis thaliana
AT2G02980 10.0kb upstream 10.0kb upstream 12027 true Chr2: 858359-870385 Arabidopsis thaliana
AT2G02980 10.0kb upstream 10.0kb upstream 10000 false Chr2: 858359-868358 Arabidopsis thaliana
AT2G02980 10.0kb downstream 10.0kb downstream 12027 true Chr2: 868359-880385 Arabidopsis thaliana
AT2G02980 10.0kb downstream 10.0kb downstream 10000 false Chr2: 870386-880385 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377914 5261 Brassicaceae View MSA
123841181 5264 Brassicales-Malvales View MSA
124347410 5266 SBM View MSA
124245481 5268 Malvidae View MSA
124072779 5270 Rosid View MSA
123753779 5271 Pentapetalae View MSA
122797667 5272 Eudicot View MSA
122051669 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351733 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.356        
cufflinks 1.143        
cufflinks 3.607       High
cufflinks 1.319        
cufflinks 2.325        
cufflinks 0.851       Low

0 Strain