Gene : SPR1 A. thaliana TAIR10
Primary Identifier:  ? AT2G03680 Defline:  (1 of 3) PTHR33403:SF1 - PROTEIN SPIRAL1
Genomic Order:  262 Name:  ? AT2G03680
Secondary Identifier:  ? PAC:19640034
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G03680 0.5kb upstream 0.5kb upstream 1756 true Chr2: 1120300-1122055 Arabidopsis thaliana
AT2G03680 0.5kb upstream 0.5kb upstream 500 false Chr2: 1120300-1120799 Arabidopsis thaliana
AT2G03680 0.5kb downstream 0.5kb downstream 1756 true Chr2: 1120800-1122555 Arabidopsis thaliana
AT2G03680 0.5kb downstream 0.5kb downstream 500 false Chr2: 1122056-1122555 Arabidopsis thaliana
AT2G03680 1.0kb upstream 1.0kb upstream 2256 true Chr2: 1119800-1122055 Arabidopsis thaliana
AT2G03680 1.0kb upstream 1.0kb upstream 1000 false Chr2: 1119800-1120799 Arabidopsis thaliana
AT2G03680 1.0kb downstream 1.0kb downstream 2256 true Chr2: 1120800-1123055 Arabidopsis thaliana
AT2G03680 1.0kb downstream 1.0kb downstream 1000 false Chr2: 1122056-1123055 Arabidopsis thaliana
AT2G03680 2.0kb upstream 2.0kb upstream 3256 true Chr2: 1118800-1122055 Arabidopsis thaliana
AT2G03680 2.0kb upstream 2.0kb upstream 2000 false Chr2: 1118800-1120799 Arabidopsis thaliana
AT2G03680 2.0kb downstream 2.0kb downstream 3256 true Chr2: 1120800-1124055 Arabidopsis thaliana
AT2G03680 2.0kb downstream 2.0kb downstream 2000 false Chr2: 1122056-1124055 Arabidopsis thaliana
AT2G03680 5.0kb upstream 5.0kb upstream 6256 true Chr2: 1115800-1122055 Arabidopsis thaliana
AT2G03680 5.0kb upstream 5.0kb upstream 5000 false Chr2: 1115800-1120799 Arabidopsis thaliana
AT2G03680 5.0kb downstream 5.0kb downstream 6256 true Chr2: 1120800-1127055 Arabidopsis thaliana
AT2G03680 5.0kb downstream 5.0kb downstream 5000 false Chr2: 1122056-1127055 Arabidopsis thaliana
AT2G03680 10.0kb upstream 10.0kb upstream 11256 true Chr2: 1110800-1122055 Arabidopsis thaliana
AT2G03680 10.0kb upstream 10.0kb upstream 10000 false Chr2: 1110800-1120799 Arabidopsis thaliana
AT2G03680 10.0kb downstream 10.0kb downstream 11256 true Chr2: 1120800-1132055 Arabidopsis thaliana
AT2G03680 10.0kb downstream 10.0kb downstream 10000 false Chr2: 1122056-1132055 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368697 5261 Brassicaceae View MSA
123799633 5264 Brassicales-Malvales View MSA
124348761 5266 SBM View MSA
124253135 5268 Malvidae View MSA
124060662 5270 Rosid View MSA
123749851 5271 Pentapetalae View MSA
122787340 5272 Eudicot View MSA
122045105 5273 Angiosperm View MSA
121351504 5274 Embryophyte View MSA
123425662 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 43.819     High  
cufflinks 82.74     High  
cufflinks 35.119     High Low
cufflinks 74.734     High  
cufflinks 37.694     High  
cufflinks 91.935     High High

0 Strain