Gene : AT1G74210 A. thaliana TAIR10

Defline:  (1 of 1) PTHR23344:SF7 - GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE Genomic Order:  6389
Name:  ? AT1G74210 Secondary Identifier:  ? PAC:19656597

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-7409 Arabidopsis thaliana pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G74210 0.5kb upstream 0.5kb upstream 3128 true Chr1: 27909814-27912941 Arabidopsis thaliana
AT1G74210 0.5kb upstream 0.5kb upstream 500 false Chr1: 27909814-27910313 Arabidopsis thaliana
AT1G74210 0.5kb downstream 0.5kb downstream 3128 true Chr1: 27910314-27913441 Arabidopsis thaliana
AT1G74210 0.5kb downstream 0.5kb downstream 500 false Chr1: 27912942-27913441 Arabidopsis thaliana
AT1G74210 1.0kb upstream 1.0kb upstream 3628 true Chr1: 27909314-27912941 Arabidopsis thaliana
AT1G74210 1.0kb upstream 1.0kb upstream 1000 false Chr1: 27909314-27910313 Arabidopsis thaliana
AT1G74210 1.0kb downstream 1.0kb downstream 3628 true Chr1: 27910314-27913941 Arabidopsis thaliana
AT1G74210 1.0kb downstream 1.0kb downstream 1000 false Chr1: 27912942-27913941 Arabidopsis thaliana
AT1G74210 2.0kb upstream 2.0kb upstream 4628 true Chr1: 27908314-27912941 Arabidopsis thaliana
AT1G74210 2.0kb upstream 2.0kb upstream 2000 false Chr1: 27908314-27910313 Arabidopsis thaliana
AT1G74210 2.0kb downstream 2.0kb downstream 4628 true Chr1: 27910314-27914941 Arabidopsis thaliana
AT1G74210 2.0kb downstream 2.0kb downstream 2000 false Chr1: 27912942-27914941 Arabidopsis thaliana
AT1G74210 5.0kb upstream 5.0kb upstream 7628 true Chr1: 27905314-27912941 Arabidopsis thaliana
AT1G74210 5.0kb upstream 5.0kb upstream 5000 false Chr1: 27905314-27910313 Arabidopsis thaliana
AT1G74210 5.0kb downstream 5.0kb downstream 7628 true Chr1: 27910314-27917941 Arabidopsis thaliana
AT1G74210 5.0kb downstream 5.0kb downstream 5000 false Chr1: 27912942-27917941 Arabidopsis thaliana
AT1G74210 10.0kb upstream 10.0kb upstream 12628 true Chr1: 27900314-27912941 Arabidopsis thaliana
AT1G74210 10.0kb upstream 10.0kb upstream 10000 false Chr1: 27900314-27910313 Arabidopsis thaliana
AT1G74210 10.0kb downstream 10.0kb downstream 12628 true Chr1: 27910314-27922941 Arabidopsis thaliana
AT1G74210 10.0kb downstream 10.0kb downstream 10000 false Chr1: 27912942-27922941 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375222 5261 Brassicaceae View MSA
123837095 5264 Brassicales-Malvales View MSA
124341825 5266 SBM View MSA
124250992 5268 Malvidae View MSA
124061908 5270 Rosid View MSA
123737505 5271 Pentapetalae View MSA
122790009 5272 Eudicot View MSA
122046255 5273 Angiosperm View MSA
121345517 5274 Embryophyte View MSA
123425927 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.908       High
cufflinks 5.284       Low
cufflinks 8.057        
cufflinks 8.561        
cufflinks 10.222        
cufflinks 6.712        

0 Strain