Gene : AT1G76110 A. thaliana TAIR10
Defline:  (1 of 2) PTHR13711//PTHR13711:SF202 - SWI/SNF-RELATED CHROMATIN BINDING PROTEIN // HIGH MOBILITY GROUP B PROTEIN 10-RELATED Genomic Order:  6574
Name:  ? AT1G76110 Secondary Identifier:  ? PAC:19650243
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G76110 0.5kb upstream 0.5kb upstream 3045 true Chr1: 28555042-28558086 Arabidopsis thaliana
AT1G76110 0.5kb upstream 0.5kb upstream 500 false Chr1: 28557587-28558086 Arabidopsis thaliana
AT1G76110 0.5kb downstream 0.5kb downstream 3045 true Chr1: 28554542-28557586 Arabidopsis thaliana
AT1G76110 0.5kb downstream 0.5kb downstream 500 false Chr1: 28554542-28555041 Arabidopsis thaliana
AT1G76110 1.0kb upstream 1.0kb upstream 3545 true Chr1: 28555042-28558586 Arabidopsis thaliana
AT1G76110 1.0kb upstream 1.0kb upstream 1000 false Chr1: 28557587-28558586 Arabidopsis thaliana
AT1G76110 1.0kb downstream 1.0kb downstream 3545 true Chr1: 28554042-28557586 Arabidopsis thaliana
AT1G76110 1.0kb downstream 1.0kb downstream 1000 false Chr1: 28554042-28555041 Arabidopsis thaliana
AT1G76110 2.0kb upstream 2.0kb upstream 4545 true Chr1: 28555042-28559586 Arabidopsis thaliana
AT1G76110 2.0kb upstream 2.0kb upstream 2000 false Chr1: 28557587-28559586 Arabidopsis thaliana
AT1G76110 2.0kb downstream 2.0kb downstream 4545 true Chr1: 28553042-28557586 Arabidopsis thaliana
AT1G76110 2.0kb downstream 2.0kb downstream 2000 false Chr1: 28553042-28555041 Arabidopsis thaliana
AT1G76110 5.0kb upstream 5.0kb upstream 7545 true Chr1: 28555042-28562586 Arabidopsis thaliana
AT1G76110 5.0kb upstream 5.0kb upstream 5000 false Chr1: 28557587-28562586 Arabidopsis thaliana
AT1G76110 5.0kb downstream 5.0kb downstream 7545 true Chr1: 28550042-28557586 Arabidopsis thaliana
AT1G76110 5.0kb downstream 5.0kb downstream 5000 false Chr1: 28550042-28555041 Arabidopsis thaliana
AT1G76110 10.0kb upstream 10.0kb upstream 12545 true Chr1: 28555042-28567586 Arabidopsis thaliana
AT1G76110 10.0kb upstream 10.0kb upstream 10000 false Chr1: 28557587-28567586 Arabidopsis thaliana
AT1G76110 10.0kb downstream 10.0kb downstream 12545 true Chr1: 28545042-28557586 Arabidopsis thaliana
AT1G76110 10.0kb downstream 10.0kb downstream 10000 false Chr1: 28545042-28555041 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361816 5261 Brassicaceae View MSA
123833055 5264 Brassicales-Malvales View MSA
124337050 5266 SBM View MSA
124237088 5268 Malvidae View MSA
124067121 5270 Rosid View MSA
123749147 5271 Pentapetalae View MSA
122792446 5272 Eudicot View MSA
122048952 5273 Angiosperm View MSA
121343849 5274 Embryophyte View MSA
123424352 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.631        
cufflinks 0.453        
cufflinks 11.807        
cufflinks 0.241     Low Low
cufflinks 14.802        
cufflinks 0.32     Low  

0 Strain