Gene : CYP708A3 A. thaliana TAIR10

Primary Identifier:  ? AT1G78490 Defline:  (1 of 11) PTHR24286//PTHR24286:SF37 - FAMILY NOT NAMED // CYTOCHROME P450 708A2-RELATED
Genomic Order:  6823 Name:  ? AT1G78490
Secondary Identifier:  ? PAC:19656826

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G78490 0.5kb upstream 0.5kb upstream 2913 true Chr1: 29527753-29530665 Arabidopsis thaliana
AT1G78490 0.5kb upstream 0.5kb upstream 500 false Chr1: 29527753-29528252 Arabidopsis thaliana
AT1G78490 0.5kb downstream 0.5kb downstream 2913 true Chr1: 29528253-29531165 Arabidopsis thaliana
AT1G78490 0.5kb downstream 0.5kb downstream 500 false Chr1: 29530666-29531165 Arabidopsis thaliana
AT1G78490 1.0kb upstream 1.0kb upstream 3413 true Chr1: 29527253-29530665 Arabidopsis thaliana
AT1G78490 1.0kb upstream 1.0kb upstream 1000 false Chr1: 29527253-29528252 Arabidopsis thaliana
AT1G78490 1.0kb downstream 1.0kb downstream 3413 true Chr1: 29528253-29531665 Arabidopsis thaliana
AT1G78490 1.0kb downstream 1.0kb downstream 1000 false Chr1: 29530666-29531665 Arabidopsis thaliana
AT1G78490 2.0kb upstream 2.0kb upstream 4413 true Chr1: 29526253-29530665 Arabidopsis thaliana
AT1G78490 2.0kb upstream 2.0kb upstream 2000 false Chr1: 29526253-29528252 Arabidopsis thaliana
AT1G78490 2.0kb downstream 2.0kb downstream 4413 true Chr1: 29528253-29532665 Arabidopsis thaliana
AT1G78490 2.0kb downstream 2.0kb downstream 2000 false Chr1: 29530666-29532665 Arabidopsis thaliana
AT1G78490 5.0kb upstream 5.0kb upstream 7413 true Chr1: 29523253-29530665 Arabidopsis thaliana
AT1G78490 5.0kb upstream 5.0kb upstream 5000 false Chr1: 29523253-29528252 Arabidopsis thaliana
AT1G78490 5.0kb downstream 5.0kb downstream 7413 true Chr1: 29528253-29535665 Arabidopsis thaliana
AT1G78490 5.0kb downstream 5.0kb downstream 5000 false Chr1: 29530666-29535665 Arabidopsis thaliana
AT1G78490 10.0kb upstream 10.0kb upstream 12413 true Chr1: 29518253-29530665 Arabidopsis thaliana
AT1G78490 10.0kb upstream 10.0kb upstream 10000 false Chr1: 29518253-29528252 Arabidopsis thaliana
AT1G78490 10.0kb downstream 10.0kb downstream 12413 true Chr1: 29528253-29540665 Arabidopsis thaliana
AT1G78490 10.0kb downstream 10.0kb downstream 10000 false Chr1: 29530666-29540665 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121512119 5273 Angiosperm View MSA
122380491 5261 Brassicaceae View MSA
123802744 5264 Brassicales-Malvales View MSA
124299912 5266 SBM View MSA
124151213 5268 Malvidae View MSA
123876694 5270 Rosid View MSA
123460336 5271 Pentapetalae View MSA
122495712 5272 Eudicot View MSA
120785145 5274 Embryophyte View MSA
122827018 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 19.636        
cufflinks 63.926     High  
cufflinks 16.432       Low
cufflinks 79.629     High High
cufflinks 17.745        
cufflinks 58.276     High  

0 Strain