Gene : WRKY61 A. thaliana TAIR10
Primary Identifier:  ? AT1G18860 Defline:  (1 of 4) PTHR31429:SF1 - WRKY FAMILY TRANSCRIPTION FACTOR-RELATED
Genomic Order:  1898 Name:  ? AT1G18860
Secondary Identifier:  ? PAC:19650959
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G18860 0.5kb upstream 0.5kb upstream 2236 true Chr1: 6508992-6511227 Arabidopsis thaliana
AT1G18860 0.5kb upstream 0.5kb upstream 500 false Chr1: 6508992-6509491 Arabidopsis thaliana
AT1G18860 0.5kb downstream 0.5kb downstream 2236 true Chr1: 6509492-6511727 Arabidopsis thaliana
AT1G18860 0.5kb downstream 0.5kb downstream 500 false Chr1: 6511228-6511727 Arabidopsis thaliana
AT1G18860 1.0kb upstream 1.0kb upstream 2736 true Chr1: 6508492-6511227 Arabidopsis thaliana
AT1G18860 1.0kb upstream 1.0kb upstream 1000 false Chr1: 6508492-6509491 Arabidopsis thaliana
AT1G18860 1.0kb downstream 1.0kb downstream 2736 true Chr1: 6509492-6512227 Arabidopsis thaliana
AT1G18860 1.0kb downstream 1.0kb downstream 1000 false Chr1: 6511228-6512227 Arabidopsis thaliana
AT1G18860 2.0kb upstream 2.0kb upstream 3736 true Chr1: 6507492-6511227 Arabidopsis thaliana
AT1G18860 2.0kb upstream 2.0kb upstream 2000 false Chr1: 6507492-6509491 Arabidopsis thaliana
AT1G18860 2.0kb downstream 2.0kb downstream 3736 true Chr1: 6509492-6513227 Arabidopsis thaliana
AT1G18860 2.0kb downstream 2.0kb downstream 2000 false Chr1: 6511228-6513227 Arabidopsis thaliana
AT1G18860 5.0kb upstream 5.0kb upstream 6736 true Chr1: 6504492-6511227 Arabidopsis thaliana
AT1G18860 5.0kb upstream 5.0kb upstream 5000 false Chr1: 6504492-6509491 Arabidopsis thaliana
AT1G18860 5.0kb downstream 5.0kb downstream 6736 true Chr1: 6509492-6516227 Arabidopsis thaliana
AT1G18860 5.0kb downstream 5.0kb downstream 5000 false Chr1: 6511228-6516227 Arabidopsis thaliana
AT1G18860 10.0kb upstream 10.0kb upstream 11736 true Chr1: 6499492-6511227 Arabidopsis thaliana
AT1G18860 10.0kb upstream 10.0kb upstream 10000 false Chr1: 6499492-6509491 Arabidopsis thaliana
AT1G18860 10.0kb downstream 10.0kb downstream 11736 true Chr1: 6509492-6521227 Arabidopsis thaliana
AT1G18860 10.0kb downstream 10.0kb downstream 10000 false Chr1: 6511228-6521227 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368757 5261 Brassicaceae View MSA
123799647 5264 Brassicales-Malvales View MSA
124297147 5266 SBM View MSA
124149108 5268 Malvidae View MSA
124070003 5270 Rosid View MSA
123745248 5271 Pentapetalae View MSA
122796714 5272 Eudicot View MSA
122044193 5273 Angiosperm View MSA
121350483 5274 Embryophyte View MSA
123381752 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.917        
cufflinks 0.522        
cufflinks 0.192     Low Low
cufflinks 1.199       High
cufflinks 0.274        
cufflinks 0.61        

0 Strain