Gene : MMZ1 A. thaliana TAIR10
Primary Identifier:  ? AT1G23260 Defline:  (1 of 2) PTHR24067//PTHR24067:SF118 - UBIQUITIN-CONJUGATING ENZYME E2 // SUBFAMILY NOT NAMED
Genomic Order:  2360 Name:  ? AT1G23260
Secondary Identifier:  ? PAC:19650204
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-7511 Arabidopsis thaliana pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G23260 0.5kb upstream 0.5kb upstream 2203 true Chr1: 8256986-8259188 Arabidopsis thaliana
AT1G23260 0.5kb upstream 0.5kb upstream 500 false Chr1: 8258689-8259188 Arabidopsis thaliana
AT1G23260 0.5kb downstream 0.5kb downstream 2203 true Chr1: 8256486-8258688 Arabidopsis thaliana
AT1G23260 0.5kb downstream 0.5kb downstream 500 false Chr1: 8256486-8256985 Arabidopsis thaliana
AT1G23260 1.0kb upstream 1.0kb upstream 2703 true Chr1: 8256986-8259688 Arabidopsis thaliana
AT1G23260 1.0kb upstream 1.0kb upstream 1000 false Chr1: 8258689-8259688 Arabidopsis thaliana
AT1G23260 1.0kb downstream 1.0kb downstream 2703 true Chr1: 8255986-8258688 Arabidopsis thaliana
AT1G23260 1.0kb downstream 1.0kb downstream 1000 false Chr1: 8255986-8256985 Arabidopsis thaliana
AT1G23260 2.0kb upstream 2.0kb upstream 3703 true Chr1: 8256986-8260688 Arabidopsis thaliana
AT1G23260 2.0kb upstream 2.0kb upstream 2000 false Chr1: 8258689-8260688 Arabidopsis thaliana
AT1G23260 2.0kb downstream 2.0kb downstream 3703 true Chr1: 8254986-8258688 Arabidopsis thaliana
AT1G23260 2.0kb downstream 2.0kb downstream 2000 false Chr1: 8254986-8256985 Arabidopsis thaliana
AT1G23260 5.0kb upstream 5.0kb upstream 6703 true Chr1: 8256986-8263688 Arabidopsis thaliana
AT1G23260 5.0kb upstream 5.0kb upstream 5000 false Chr1: 8258689-8263688 Arabidopsis thaliana
AT1G23260 5.0kb downstream 5.0kb downstream 6703 true Chr1: 8251986-8258688 Arabidopsis thaliana
AT1G23260 5.0kb downstream 5.0kb downstream 5000 false Chr1: 8251986-8256985 Arabidopsis thaliana
AT1G23260 10.0kb upstream 10.0kb upstream 11703 true Chr1: 8256986-8268688 Arabidopsis thaliana
AT1G23260 10.0kb upstream 10.0kb upstream 10000 false Chr1: 8258689-8268688 Arabidopsis thaliana
AT1G23260 10.0kb downstream 10.0kb downstream 11703 true Chr1: 8246986-8258688 Arabidopsis thaliana
AT1G23260 10.0kb downstream 10.0kb downstream 10000 false Chr1: 8246986-8256985 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367155 5261 Brassicaceae View MSA
123837333 5264 Brassicales-Malvales View MSA
124342282 5266 SBM View MSA
124253916 5268 Malvidae View MSA
124063441 5270 Rosid View MSA
123741695 5271 Pentapetalae View MSA
122789477 5272 Eudicot View MSA
122045829 5273 Angiosperm View MSA
121310510 5274 Embryophyte View MSA
123425410 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 23.295        
cufflinks 28.557        
cufflinks 18.964       Low
cufflinks 29.952       High
cufflinks 19.276       Low
cufflinks 27.565        

0 Strain