Gene : AT1G11510 A. thaliana TAIR10
Defline:  (1 of 17) PTHR31662//PTHR31662:SF1 - FAMILY NOT NAMED // A_IG002N01.32 PROTEIN-RELATED Genomic Order:  1124
Name:  ? AT1G11510 Secondary Identifier:  ? PAC:19650561
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G11510 0.5kb upstream 0.5kb upstream 1559 true Chr1: 3871778-3873336 Arabidopsis thaliana
AT1G11510 0.5kb upstream 0.5kb upstream 500 false Chr1: 3872837-3873336 Arabidopsis thaliana
AT1G11510 0.5kb downstream 0.5kb downstream 1559 true Chr1: 3871278-3872836 Arabidopsis thaliana
AT1G11510 0.5kb downstream 0.5kb downstream 500 false Chr1: 3871278-3871777 Arabidopsis thaliana
AT1G11510 1.0kb upstream 1.0kb upstream 2059 true Chr1: 3871778-3873836 Arabidopsis thaliana
AT1G11510 1.0kb upstream 1.0kb upstream 1000 false Chr1: 3872837-3873836 Arabidopsis thaliana
AT1G11510 1.0kb downstream 1.0kb downstream 2059 true Chr1: 3870778-3872836 Arabidopsis thaliana
AT1G11510 1.0kb downstream 1.0kb downstream 1000 false Chr1: 3870778-3871777 Arabidopsis thaliana
AT1G11510 2.0kb upstream 2.0kb upstream 3059 true Chr1: 3871778-3874836 Arabidopsis thaliana
AT1G11510 2.0kb upstream 2.0kb upstream 2000 false Chr1: 3872837-3874836 Arabidopsis thaliana
AT1G11510 2.0kb downstream 2.0kb downstream 3059 true Chr1: 3869778-3872836 Arabidopsis thaliana
AT1G11510 2.0kb downstream 2.0kb downstream 2000 false Chr1: 3869778-3871777 Arabidopsis thaliana
AT1G11510 5.0kb upstream 5.0kb upstream 6059 true Chr1: 3871778-3877836 Arabidopsis thaliana
AT1G11510 5.0kb upstream 5.0kb upstream 5000 false Chr1: 3872837-3877836 Arabidopsis thaliana
AT1G11510 5.0kb downstream 5.0kb downstream 6059 true Chr1: 3866778-3872836 Arabidopsis thaliana
AT1G11510 5.0kb downstream 5.0kb downstream 5000 false Chr1: 3866778-3871777 Arabidopsis thaliana
AT1G11510 10.0kb upstream 10.0kb upstream 11059 true Chr1: 3871778-3882836 Arabidopsis thaliana
AT1G11510 10.0kb upstream 10.0kb upstream 10000 false Chr1: 3872837-3882836 Arabidopsis thaliana
AT1G11510 10.0kb downstream 10.0kb downstream 11059 true Chr1: 3861778-3872836 Arabidopsis thaliana
AT1G11510 10.0kb downstream 10.0kb downstream 10000 false Chr1: 3861778-3871777 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374387 5261 Brassicaceae View MSA
123837501 5264 Brassicales-Malvales View MSA
124345875 5266 SBM View MSA
124252419 5268 Malvidae View MSA
124072235 5270 Rosid View MSA
123751469 5271 Pentapetalae View MSA
122797914 5272 Eudicot View MSA
122051487 5273 Angiosperm View MSA
121348911 5274 Embryophyte View MSA
123381074 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.014     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain