Gene : AT1G15870 A. thaliana TAIR10
Defline:  (1 of 3) PTHR10826//PTHR10826:SF14 - COMPLEMENT COMPONENT 1 // SUBFAMILY NOT NAMED Genomic Order:  1596
Name:  ? AT1G15870 Secondary Identifier:  ? PAC:19650699
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G15870 0.5kb upstream 0.5kb upstream 1846 true Chr1: 5456584-5458429 Arabidopsis thaliana
AT1G15870 0.5kb upstream 0.5kb upstream 500 false Chr1: 5456584-5457083 Arabidopsis thaliana
AT1G15870 0.5kb downstream 0.5kb downstream 1846 true Chr1: 5457084-5458929 Arabidopsis thaliana
AT1G15870 0.5kb downstream 0.5kb downstream 500 false Chr1: 5458430-5458929 Arabidopsis thaliana
AT1G15870 1.0kb upstream 1.0kb upstream 2346 true Chr1: 5456084-5458429 Arabidopsis thaliana
AT1G15870 1.0kb upstream 1.0kb upstream 1000 false Chr1: 5456084-5457083 Arabidopsis thaliana
AT1G15870 1.0kb downstream 1.0kb downstream 2346 true Chr1: 5457084-5459429 Arabidopsis thaliana
AT1G15870 1.0kb downstream 1.0kb downstream 1000 false Chr1: 5458430-5459429 Arabidopsis thaliana
AT1G15870 2.0kb upstream 2.0kb upstream 3346 true Chr1: 5455084-5458429 Arabidopsis thaliana
AT1G15870 2.0kb upstream 2.0kb upstream 2000 false Chr1: 5455084-5457083 Arabidopsis thaliana
AT1G15870 2.0kb downstream 2.0kb downstream 3346 true Chr1: 5457084-5460429 Arabidopsis thaliana
AT1G15870 2.0kb downstream 2.0kb downstream 2000 false Chr1: 5458430-5460429 Arabidopsis thaliana
AT1G15870 5.0kb upstream 5.0kb upstream 6346 true Chr1: 5452084-5458429 Arabidopsis thaliana
AT1G15870 5.0kb upstream 5.0kb upstream 5000 false Chr1: 5452084-5457083 Arabidopsis thaliana
AT1G15870 5.0kb downstream 5.0kb downstream 6346 true Chr1: 5457084-5463429 Arabidopsis thaliana
AT1G15870 5.0kb downstream 5.0kb downstream 5000 false Chr1: 5458430-5463429 Arabidopsis thaliana
AT1G15870 10.0kb upstream 10.0kb upstream 11346 true Chr1: 5447084-5458429 Arabidopsis thaliana
AT1G15870 10.0kb upstream 10.0kb upstream 10000 false Chr1: 5447084-5457083 Arabidopsis thaliana
AT1G15870 10.0kb downstream 10.0kb downstream 11346 true Chr1: 5457084-5468429 Arabidopsis thaliana
AT1G15870 10.0kb downstream 10.0kb downstream 10000 false Chr1: 5458430-5468429 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377096 5261 Brassicaceae View MSA
123830411 5264 Brassicales-Malvales View MSA
124339034 5266 SBM View MSA
124250032 5268 Malvidae View MSA
124062548 5270 Rosid View MSA
123745257 5271 Pentapetalae View MSA
122790329 5272 Eudicot View MSA
122044683 5273 Angiosperm View MSA
121310327 5274 Embryophyte View MSA
123426635 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.155        
cufflinks 0.913        
cufflinks 0.944        
cufflinks 1.164        
cufflinks 0.654       Low
cufflinks 1.231        

0 Strain