Sequence Feature Displayer
Ontology Annotation Displayer
5 Pathways
Pathway Identifier | Organism Name | Analysis Method | Analysis Status |
---|---|---|---|
Athaliana PWY0-1319 | Arabidopsis thaliana | pathologic | |
Athaliana PWY4FS-7 | Arabidopsis thaliana | pathologic | |
Athaliana PWY-7411 | Arabidopsis thaliana | pathologic | |
Athaliana PWY-7417 | Arabidopsis thaliana | pathologic | |
Athaliana TRIGLSYN-PWY | Arabidopsis thaliana | pathologic |
Other
20 Flanking Regions
Region Name | Flank Size | Direction | Length | Gene Included? | Chromosome Location | Organism Name |
---|---|---|---|---|---|---|
AT1G51260 0.5kb upstream | 0.5kb | upstream | 2766 | true | Chr1: 19003376-19006141 | Arabidopsis thaliana |
AT1G51260 0.5kb upstream | 0.5kb | upstream | 500 | false | Chr1: 19005642-19006141 | Arabidopsis thaliana |
AT1G51260 0.5kb downstream | 0.5kb | downstream | 2766 | true | Chr1: 19002876-19005641 | Arabidopsis thaliana |
AT1G51260 0.5kb downstream | 0.5kb | downstream | 500 | false | Chr1: 19002876-19003375 | Arabidopsis thaliana |
AT1G51260 1.0kb upstream | 1.0kb | upstream | 3266 | true | Chr1: 19003376-19006641 | Arabidopsis thaliana |
AT1G51260 1.0kb upstream | 1.0kb | upstream | 1000 | false | Chr1: 19005642-19006641 | Arabidopsis thaliana |
AT1G51260 1.0kb downstream | 1.0kb | downstream | 3266 | true | Chr1: 19002376-19005641 | Arabidopsis thaliana |
AT1G51260 1.0kb downstream | 1.0kb | downstream | 1000 | false | Chr1: 19002376-19003375 | Arabidopsis thaliana |
AT1G51260 2.0kb upstream | 2.0kb | upstream | 4266 | true | Chr1: 19003376-19007641 | Arabidopsis thaliana |
AT1G51260 2.0kb upstream | 2.0kb | upstream | 2000 | false | Chr1: 19005642-19007641 | Arabidopsis thaliana |
AT1G51260 2.0kb downstream | 2.0kb | downstream | 4266 | true | Chr1: 19001376-19005641 | Arabidopsis thaliana |
AT1G51260 2.0kb downstream | 2.0kb | downstream | 2000 | false | Chr1: 19001376-19003375 | Arabidopsis thaliana |
AT1G51260 5.0kb upstream | 5.0kb | upstream | 7266 | true | Chr1: 19003376-19010641 | Arabidopsis thaliana |
AT1G51260 5.0kb upstream | 5.0kb | upstream | 5000 | false | Chr1: 19005642-19010641 | Arabidopsis thaliana |
AT1G51260 5.0kb downstream | 5.0kb | downstream | 7266 | true | Chr1: 18998376-19005641 | Arabidopsis thaliana |
AT1G51260 5.0kb downstream | 5.0kb | downstream | 5000 | false | Chr1: 18998376-19003375 | Arabidopsis thaliana |
AT1G51260 10.0kb upstream | 10.0kb | upstream | 12266 | true | Chr1: 19003376-19015641 | Arabidopsis thaliana |
AT1G51260 10.0kb upstream | 10.0kb | upstream | 10000 | false | Chr1: 19005642-19015641 | Arabidopsis thaliana |
AT1G51260 10.0kb downstream | 10.0kb | downstream | 12266 | true | Chr1: 18993376-19005641 | Arabidopsis thaliana |
AT1G51260 10.0kb downstream | 10.0kb | downstream | 10000 | false | Chr1: 18993376-19003375 | Arabidopsis thaliana |
10 Protein Familys
Cluster ID | Method ID | Method Name | Sequence Alignment |
---|---|---|---|
122028069 | 5273 | Angiosperm | View MSA |
122373400 | 5261 | Brassicaceae | View MSA |
123833102 | 5264 | Brassicales-Malvales | View MSA |
124341197 | 5266 | SBM | View MSA |
124244729 | 5268 | Malvidae | View MSA |
124037222 | 5270 | Rosid | View MSA |
123753579 | 5271 | Pentapetalae | View MSA |
122775158 | 5272 | Eudicot | View MSA |
121297614 | 5274 | Embryophyte | View MSA |
123335652 | 5275 | Viridiplantae | View MSA |
6 Rna Seq Expressionss
Analysis Method | Abundance | Low Confidence Limit | High Confidence Limit | Relative Library Expression | Relative Locus Expression |
---|---|---|---|---|---|
cufflinks | 0.0 | Not Expressed | Not Expressed | ||
cufflinks | 0.087 | Low | Low | ||
cufflinks | 0.0 | Not Expressed | Not Expressed | ||
cufflinks | 0.272 | Low | |||
cufflinks | 0.0 | Not Expressed | Not Expressed | ||
cufflinks | 0.249 | Low |