Gene : MMH-1 A. thaliana TAIR10
Primary Identifier:  ? AT1G52500 Defline:  (1 of 1) 3.2.2.23 - DNA-formamidopyrimidine glycosylase / Formamidopyrimidine-DNA glycosylase
Genomic Order:  4280 Name:  ? AT1G52500
Secondary Identifier:  ? PAC:19649590
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

8 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G52500 0.5kb upstream 0.5kb upstream 3631 true Chr1: 19559483-19563113 Arabidopsis thaliana
AT1G52500 0.5kb upstream 0.5kb upstream 500 false Chr1: 19559483-19559982 Arabidopsis thaliana
AT1G52500 0.5kb downstream 0.5kb downstream 3631 true Chr1: 19559983-19563613 Arabidopsis thaliana
AT1G52500 0.5kb downstream 0.5kb downstream 500 false Chr1: 19563114-19563613 Arabidopsis thaliana
AT1G52500 1.0kb upstream 1.0kb upstream 4131 true Chr1: 19558983-19563113 Arabidopsis thaliana
AT1G52500 1.0kb upstream 1.0kb upstream 1000 false Chr1: 19558983-19559982 Arabidopsis thaliana
AT1G52500 1.0kb downstream 1.0kb downstream 4131 true Chr1: 19559983-19564113 Arabidopsis thaliana
AT1G52500 1.0kb downstream 1.0kb downstream 1000 false Chr1: 19563114-19564113 Arabidopsis thaliana
AT1G52500 2.0kb upstream 2.0kb upstream 5131 true Chr1: 19557983-19563113 Arabidopsis thaliana
AT1G52500 2.0kb upstream 2.0kb upstream 2000 false Chr1: 19557983-19559982 Arabidopsis thaliana
AT1G52500 2.0kb downstream 2.0kb downstream 5131 true Chr1: 19559983-19565113 Arabidopsis thaliana
AT1G52500 2.0kb downstream 2.0kb downstream 2000 false Chr1: 19563114-19565113 Arabidopsis thaliana
AT1G52500 5.0kb upstream 5.0kb upstream 8131 true Chr1: 19554983-19563113 Arabidopsis thaliana
AT1G52500 5.0kb upstream 5.0kb upstream 5000 false Chr1: 19554983-19559982 Arabidopsis thaliana
AT1G52500 5.0kb downstream 5.0kb downstream 8131 true Chr1: 19559983-19568113 Arabidopsis thaliana
AT1G52500 5.0kb downstream 5.0kb downstream 5000 false Chr1: 19563114-19568113 Arabidopsis thaliana
AT1G52500 10.0kb upstream 10.0kb upstream 13131 true Chr1: 19549983-19563113 Arabidopsis thaliana
AT1G52500 10.0kb upstream 10.0kb upstream 10000 false Chr1: 19549983-19559982 Arabidopsis thaliana
AT1G52500 10.0kb downstream 10.0kb downstream 13131 true Chr1: 19559983-19573113 Arabidopsis thaliana
AT1G52500 10.0kb downstream 10.0kb downstream 10000 false Chr1: 19563114-19573113 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378446 5261 Brassicaceae View MSA
123836814 5264 Brassicales-Malvales View MSA
124346816 5266 SBM View MSA
124245490 5268 Malvidae View MSA
124069357 5270 Rosid View MSA
123741491 5271 Pentapetalae View MSA
122770061 5272 Eudicot View MSA
122048986 5273 Angiosperm View MSA
121348452 5274 Embryophyte View MSA
123427632 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.4        
cufflinks 5.709       High
cufflinks 1.923        
cufflinks 4.656        
cufflinks 1.801       Low
cufflinks 4.433        

0 Strain