Gene : AT1G52695 A. thaliana TAIR10
Defline:  (1 of 5) 3.1.1.5 - Lysophospholipase / Phospholipase B Genomic Order:  4301
Name:  ? AT1G52695 Secondary Identifier:  ? PAC:19650031
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-7409 Arabidopsis thaliana pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G52695 0.5kb upstream 0.5kb upstream 2724 true Chr1: 19621238-19623961 Arabidopsis thaliana
AT1G52695 0.5kb upstream 0.5kb upstream 500 false Chr1: 19623462-19623961 Arabidopsis thaliana
AT1G52695 0.5kb downstream 0.5kb downstream 2724 true Chr1: 19620738-19623461 Arabidopsis thaliana
AT1G52695 0.5kb downstream 0.5kb downstream 500 false Chr1: 19620738-19621237 Arabidopsis thaliana
AT1G52695 1.0kb upstream 1.0kb upstream 3224 true Chr1: 19621238-19624461 Arabidopsis thaliana
AT1G52695 1.0kb upstream 1.0kb upstream 1000 false Chr1: 19623462-19624461 Arabidopsis thaliana
AT1G52695 1.0kb downstream 1.0kb downstream 3224 true Chr1: 19620238-19623461 Arabidopsis thaliana
AT1G52695 1.0kb downstream 1.0kb downstream 1000 false Chr1: 19620238-19621237 Arabidopsis thaliana
AT1G52695 2.0kb upstream 2.0kb upstream 4224 true Chr1: 19621238-19625461 Arabidopsis thaliana
AT1G52695 2.0kb upstream 2.0kb upstream 2000 false Chr1: 19623462-19625461 Arabidopsis thaliana
AT1G52695 2.0kb downstream 2.0kb downstream 4224 true Chr1: 19619238-19623461 Arabidopsis thaliana
AT1G52695 2.0kb downstream 2.0kb downstream 2000 false Chr1: 19619238-19621237 Arabidopsis thaliana
AT1G52695 5.0kb upstream 5.0kb upstream 7224 true Chr1: 19621238-19628461 Arabidopsis thaliana
AT1G52695 5.0kb upstream 5.0kb upstream 5000 false Chr1: 19623462-19628461 Arabidopsis thaliana
AT1G52695 5.0kb downstream 5.0kb downstream 7224 true Chr1: 19616238-19623461 Arabidopsis thaliana
AT1G52695 5.0kb downstream 5.0kb downstream 5000 false Chr1: 19616238-19621237 Arabidopsis thaliana
AT1G52695 10.0kb upstream 10.0kb upstream 12224 true Chr1: 19621238-19633461 Arabidopsis thaliana
AT1G52695 10.0kb upstream 10.0kb upstream 10000 false Chr1: 19623462-19633461 Arabidopsis thaliana
AT1G52695 10.0kb downstream 10.0kb downstream 12224 true Chr1: 19611238-19623461 Arabidopsis thaliana
AT1G52695 10.0kb downstream 10.0kb downstream 10000 false Chr1: 19611238-19621237 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362714 5261 Brassicaceae View MSA
123842121 5264 Brassicales-Malvales View MSA
124351900 5266 SBM View MSA
124247684 5268 Malvidae View MSA
124070848 5270 Rosid View MSA
123747021 5271 Pentapetalae View MSA
122795492 5272 Eudicot View MSA
122046747 5273 Angiosperm View MSA
121349351 5274 Embryophyte View MSA
123428773 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain