Gene : KDR A. thaliana TAIR10
Primary Identifier:  ? AT1G26945 Defline:  (1 of 2) PTHR12565//PTHR12565:SF148 - STEROL REGULATORY ELEMENT-BINDING PROTEIN // PROTEIN BANQUO 3
Genomic Order:  2669 Name:  ? AT1G26945
Secondary Identifier:  ? PAC:19651590
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G26945 0.5kb upstream 0.5kb upstream 1808 true Chr1: 9350954-9352761 Arabidopsis thaliana
AT1G26945 0.5kb upstream 0.5kb upstream 500 false Chr1: 9350954-9351453 Arabidopsis thaliana
AT1G26945 0.5kb downstream 0.5kb downstream 1808 true Chr1: 9351454-9353261 Arabidopsis thaliana
AT1G26945 0.5kb downstream 0.5kb downstream 500 false Chr1: 9352762-9353261 Arabidopsis thaliana
AT1G26945 1.0kb upstream 1.0kb upstream 2308 true Chr1: 9350454-9352761 Arabidopsis thaliana
AT1G26945 1.0kb upstream 1.0kb upstream 1000 false Chr1: 9350454-9351453 Arabidopsis thaliana
AT1G26945 1.0kb downstream 1.0kb downstream 2308 true Chr1: 9351454-9353761 Arabidopsis thaliana
AT1G26945 1.0kb downstream 1.0kb downstream 1000 false Chr1: 9352762-9353761 Arabidopsis thaliana
AT1G26945 2.0kb upstream 2.0kb upstream 3308 true Chr1: 9349454-9352761 Arabidopsis thaliana
AT1G26945 2.0kb upstream 2.0kb upstream 2000 false Chr1: 9349454-9351453 Arabidopsis thaliana
AT1G26945 2.0kb downstream 2.0kb downstream 3308 true Chr1: 9351454-9354761 Arabidopsis thaliana
AT1G26945 2.0kb downstream 2.0kb downstream 2000 false Chr1: 9352762-9354761 Arabidopsis thaliana
AT1G26945 5.0kb upstream 5.0kb upstream 6308 true Chr1: 9346454-9352761 Arabidopsis thaliana
AT1G26945 5.0kb upstream 5.0kb upstream 5000 false Chr1: 9346454-9351453 Arabidopsis thaliana
AT1G26945 5.0kb downstream 5.0kb downstream 6308 true Chr1: 9351454-9357761 Arabidopsis thaliana
AT1G26945 5.0kb downstream 5.0kb downstream 5000 false Chr1: 9352762-9357761 Arabidopsis thaliana
AT1G26945 10.0kb upstream 10.0kb upstream 11308 true Chr1: 9341454-9352761 Arabidopsis thaliana
AT1G26945 10.0kb upstream 10.0kb upstream 10000 false Chr1: 9341454-9351453 Arabidopsis thaliana
AT1G26945 10.0kb downstream 10.0kb downstream 11308 true Chr1: 9351454-9362761 Arabidopsis thaliana
AT1G26945 10.0kb downstream 10.0kb downstream 10000 false Chr1: 9352762-9362761 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371089 5261 Brassicaceae View MSA
123828780 5264 Brassicales-Malvales View MSA
124350276 5266 SBM View MSA
124251853 5268 Malvidae View MSA
124073031 5270 Rosid View MSA
123750386 5271 Pentapetalae View MSA
122791037 5272 Eudicot View MSA
122046062 5273 Angiosperm View MSA
121310546 5274 Embryophyte View MSA
123348001 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.569        
cufflinks 1.216       Low
cufflinks 4.018        
cufflinks 2.315        
cufflinks 5.09       High
cufflinks 1.382       Low

0 Strain