Gene : AT1G30880 A. thaliana TAIR10
Genomic Order:  3059 Name:  ? AT1G30880
Secondary Identifier:  ? PAC:19654393
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G30880 0.5kb upstream 0.5kb upstream 1431 true Chr1: 10993195-10994625 Arabidopsis thaliana
AT1G30880 0.5kb upstream 0.5kb upstream 500 false Chr1: 10994126-10994625 Arabidopsis thaliana
AT1G30880 0.5kb downstream 0.5kb downstream 1431 true Chr1: 10992695-10994125 Arabidopsis thaliana
AT1G30880 0.5kb downstream 0.5kb downstream 500 false Chr1: 10992695-10993194 Arabidopsis thaliana
AT1G30880 1.0kb upstream 1.0kb upstream 1931 true Chr1: 10993195-10995125 Arabidopsis thaliana
AT1G30880 1.0kb upstream 1.0kb upstream 1000 false Chr1: 10994126-10995125 Arabidopsis thaliana
AT1G30880 1.0kb downstream 1.0kb downstream 1931 true Chr1: 10992195-10994125 Arabidopsis thaliana
AT1G30880 1.0kb downstream 1.0kb downstream 1000 false Chr1: 10992195-10993194 Arabidopsis thaliana
AT1G30880 2.0kb upstream 2.0kb upstream 2931 true Chr1: 10993195-10996125 Arabidopsis thaliana
AT1G30880 2.0kb upstream 2.0kb upstream 2000 false Chr1: 10994126-10996125 Arabidopsis thaliana
AT1G30880 2.0kb downstream 2.0kb downstream 2931 true Chr1: 10991195-10994125 Arabidopsis thaliana
AT1G30880 2.0kb downstream 2.0kb downstream 2000 false Chr1: 10991195-10993194 Arabidopsis thaliana
AT1G30880 5.0kb upstream 5.0kb upstream 5931 true Chr1: 10993195-10999125 Arabidopsis thaliana
AT1G30880 5.0kb upstream 5.0kb upstream 5000 false Chr1: 10994126-10999125 Arabidopsis thaliana
AT1G30880 5.0kb downstream 5.0kb downstream 5931 true Chr1: 10988195-10994125 Arabidopsis thaliana
AT1G30880 5.0kb downstream 5.0kb downstream 5000 false Chr1: 10988195-10993194 Arabidopsis thaliana
AT1G30880 10.0kb upstream 10.0kb upstream 10931 true Chr1: 10993195-11004125 Arabidopsis thaliana
AT1G30880 10.0kb upstream 10.0kb upstream 10000 false Chr1: 10994126-11004125 Arabidopsis thaliana
AT1G30880 10.0kb downstream 10.0kb downstream 10931 true Chr1: 10983195-10994125 Arabidopsis thaliana
AT1G30880 10.0kb downstream 10.0kb downstream 10000 false Chr1: 10983195-10993194 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380121 5261 Brassicaceae View MSA
123832781 5264 Brassicales-Malvales View MSA
124340190 5266 SBM View MSA
124243353 5268 Malvidae View MSA
124063580 5270 Rosid View MSA
123736982 5271 Pentapetalae View MSA
122790366 5272 Eudicot View MSA
122049403 5273 Angiosperm View MSA
121349103 5274 Embryophyte View MSA
123381168 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 49.781     High  
cufflinks 127.478     High High
cufflinks 56.366     High  
cufflinks 108.687     High  
cufflinks 50.04     High  
cufflinks 108.666     High  

0 Strain