Gene : AT1G76820 A. thaliana TAIR10
Defline:  (1 of 4) K03243 - translation initiation factor 5B (EIF5B) Genomic Order:  6648
Name:  ? AT1G76820 Secondary Identifier:  ? PAC:19649770
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G76820 0.5kb upstream 0.5kb upstream 5494 true Chr1: 28837073-28842566 Arabidopsis thaliana
AT1G76820 0.5kb upstream 0.5kb upstream 500 false Chr1: 28837073-28837572 Arabidopsis thaliana
AT1G76820 0.5kb downstream 0.5kb downstream 5494 true Chr1: 28837573-28843066 Arabidopsis thaliana
AT1G76820 0.5kb downstream 0.5kb downstream 500 false Chr1: 28842567-28843066 Arabidopsis thaliana
AT1G76820 1.0kb upstream 1.0kb upstream 5994 true Chr1: 28836573-28842566 Arabidopsis thaliana
AT1G76820 1.0kb upstream 1.0kb upstream 1000 false Chr1: 28836573-28837572 Arabidopsis thaliana
AT1G76820 1.0kb downstream 1.0kb downstream 5994 true Chr1: 28837573-28843566 Arabidopsis thaliana
AT1G76820 1.0kb downstream 1.0kb downstream 1000 false Chr1: 28842567-28843566 Arabidopsis thaliana
AT1G76820 2.0kb upstream 2.0kb upstream 6994 true Chr1: 28835573-28842566 Arabidopsis thaliana
AT1G76820 2.0kb upstream 2.0kb upstream 2000 false Chr1: 28835573-28837572 Arabidopsis thaliana
AT1G76820 2.0kb downstream 2.0kb downstream 6994 true Chr1: 28837573-28844566 Arabidopsis thaliana
AT1G76820 2.0kb downstream 2.0kb downstream 2000 false Chr1: 28842567-28844566 Arabidopsis thaliana
AT1G76820 5.0kb upstream 5.0kb upstream 9994 true Chr1: 28832573-28842566 Arabidopsis thaliana
AT1G76820 5.0kb upstream 5.0kb upstream 5000 false Chr1: 28832573-28837572 Arabidopsis thaliana
AT1G76820 5.0kb downstream 5.0kb downstream 9994 true Chr1: 28837573-28847566 Arabidopsis thaliana
AT1G76820 5.0kb downstream 5.0kb downstream 5000 false Chr1: 28842567-28847566 Arabidopsis thaliana
AT1G76820 10.0kb upstream 10.0kb upstream 14994 true Chr1: 28827573-28842566 Arabidopsis thaliana
AT1G76820 10.0kb upstream 10.0kb upstream 10000 false Chr1: 28827573-28837572 Arabidopsis thaliana
AT1G76820 10.0kb downstream 10.0kb downstream 14994 true Chr1: 28837573-28852566 Arabidopsis thaliana
AT1G76820 10.0kb downstream 10.0kb downstream 10000 false Chr1: 28842567-28852566 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121493156 5273 Angiosperm Singleton cluster - no MSA
122328384 5261 Brassicaceae Singleton cluster - no MSA
123769742 5264 Brassicales-Malvales Singleton cluster - no MSA
124268294 5266 SBM Singleton cluster - no MSA
124124508 5268 Malvidae Singleton cluster - no MSA
123853536 5270 Rosid Singleton cluster - no MSA
123439604 5271 Pentapetalae Singleton cluster - no MSA
122475198 5272 Eudicot Singleton cluster - no MSA
120766532 5274 Embryophyte Singleton cluster - no MSA
122808936 5275 Viridiplantae Singleton cluster - no MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.24       Low
cufflinks 4.631       High
cufflinks 2.049        
cufflinks 3.644        
cufflinks 1.952        
cufflinks 3.971        

0 Strain