Gene : AT1G77350 A. thaliana TAIR10
Defline:  (1 of 1) KOG4615 - Uncharacterized conserved protein Genomic Order:  6705
Name:  ? AT1G77350 Secondary Identifier:  ? PAC:19657826
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G77350 0.5kb upstream 0.5kb upstream 2147 true Chr1: 29069753-29071899 Arabidopsis thaliana
AT1G77350 0.5kb upstream 0.5kb upstream 500 false Chr1: 29069753-29070252 Arabidopsis thaliana
AT1G77350 0.5kb downstream 0.5kb downstream 2147 true Chr1: 29070253-29072399 Arabidopsis thaliana
AT1G77350 0.5kb downstream 0.5kb downstream 500 false Chr1: 29071900-29072399 Arabidopsis thaliana
AT1G77350 1.0kb upstream 1.0kb upstream 2647 true Chr1: 29069253-29071899 Arabidopsis thaliana
AT1G77350 1.0kb upstream 1.0kb upstream 1000 false Chr1: 29069253-29070252 Arabidopsis thaliana
AT1G77350 1.0kb downstream 1.0kb downstream 2647 true Chr1: 29070253-29072899 Arabidopsis thaliana
AT1G77350 1.0kb downstream 1.0kb downstream 1000 false Chr1: 29071900-29072899 Arabidopsis thaliana
AT1G77350 2.0kb upstream 2.0kb upstream 3647 true Chr1: 29068253-29071899 Arabidopsis thaliana
AT1G77350 2.0kb upstream 2.0kb upstream 2000 false Chr1: 29068253-29070252 Arabidopsis thaliana
AT1G77350 2.0kb downstream 2.0kb downstream 3647 true Chr1: 29070253-29073899 Arabidopsis thaliana
AT1G77350 2.0kb downstream 2.0kb downstream 2000 false Chr1: 29071900-29073899 Arabidopsis thaliana
AT1G77350 5.0kb upstream 5.0kb upstream 6647 true Chr1: 29065253-29071899 Arabidopsis thaliana
AT1G77350 5.0kb upstream 5.0kb upstream 5000 false Chr1: 29065253-29070252 Arabidopsis thaliana
AT1G77350 5.0kb downstream 5.0kb downstream 6647 true Chr1: 29070253-29076899 Arabidopsis thaliana
AT1G77350 5.0kb downstream 5.0kb downstream 5000 false Chr1: 29071900-29076899 Arabidopsis thaliana
AT1G77350 10.0kb upstream 10.0kb upstream 11647 true Chr1: 29060253-29071899 Arabidopsis thaliana
AT1G77350 10.0kb upstream 10.0kb upstream 10000 false Chr1: 29060253-29070252 Arabidopsis thaliana
AT1G77350 10.0kb downstream 10.0kb downstream 11647 true Chr1: 29070253-29081899 Arabidopsis thaliana
AT1G77350 10.0kb downstream 10.0kb downstream 10000 false Chr1: 29071900-29081899 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361803 5261 Brassicaceae View MSA
123830040 5264 Brassicales-Malvales View MSA
124340846 5266 SBM View MSA
124241812 5268 Malvidae View MSA
124067674 5270 Rosid View MSA
123737337 5271 Pentapetalae View MSA
122792320 5272 Eudicot View MSA
122045575 5273 Angiosperm View MSA
121346105 5274 Embryophyte View MSA
123380331 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.089        
cufflinks 9.763        
cufflinks 5.045       Low
cufflinks 10.093        
cufflinks 5.392        
cufflinks 10.514       High

0 Strain