Gene : ALIS5 A. thaliana TAIR10
Primary Identifier:  ? AT1G79450 Defline:  (1 of 2) PTHR10926//PTHR10926:SF28 - CELL CYCLE CONTROL PROTEIN 50 // SUBFAMILY NOT NAMED
Genomic Order:  6922 Name:  ? AT1G79450
Secondary Identifier:  ? PAC:19656706
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G79450 0.5kb upstream 0.5kb upstream 2991 true Chr1: 29887189-29890179 Arabidopsis thaliana
AT1G79450 0.5kb upstream 0.5kb upstream 500 false Chr1: 29887189-29887688 Arabidopsis thaliana
AT1G79450 0.5kb downstream 0.5kb downstream 2991 true Chr1: 29887689-29890679 Arabidopsis thaliana
AT1G79450 0.5kb downstream 0.5kb downstream 500 false Chr1: 29890180-29890679 Arabidopsis thaliana
AT1G79450 1.0kb upstream 1.0kb upstream 3491 true Chr1: 29886689-29890179 Arabidopsis thaliana
AT1G79450 1.0kb upstream 1.0kb upstream 1000 false Chr1: 29886689-29887688 Arabidopsis thaliana
AT1G79450 1.0kb downstream 1.0kb downstream 3491 true Chr1: 29887689-29891179 Arabidopsis thaliana
AT1G79450 1.0kb downstream 1.0kb downstream 1000 false Chr1: 29890180-29891179 Arabidopsis thaliana
AT1G79450 2.0kb upstream 2.0kb upstream 4491 true Chr1: 29885689-29890179 Arabidopsis thaliana
AT1G79450 2.0kb upstream 2.0kb upstream 2000 false Chr1: 29885689-29887688 Arabidopsis thaliana
AT1G79450 2.0kb downstream 2.0kb downstream 4491 true Chr1: 29887689-29892179 Arabidopsis thaliana
AT1G79450 2.0kb downstream 2.0kb downstream 2000 false Chr1: 29890180-29892179 Arabidopsis thaliana
AT1G79450 5.0kb upstream 5.0kb upstream 7491 true Chr1: 29882689-29890179 Arabidopsis thaliana
AT1G79450 5.0kb upstream 5.0kb upstream 5000 false Chr1: 29882689-29887688 Arabidopsis thaliana
AT1G79450 5.0kb downstream 5.0kb downstream 7491 true Chr1: 29887689-29895179 Arabidopsis thaliana
AT1G79450 5.0kb downstream 5.0kb downstream 5000 false Chr1: 29890180-29895179 Arabidopsis thaliana
AT1G79450 10.0kb upstream 10.0kb upstream 12491 true Chr1: 29877689-29890179 Arabidopsis thaliana
AT1G79450 10.0kb upstream 10.0kb upstream 10000 false Chr1: 29877689-29887688 Arabidopsis thaliana
AT1G79450 10.0kb downstream 10.0kb downstream 12491 true Chr1: 29887689-29900179 Arabidopsis thaliana
AT1G79450 10.0kb downstream 10.0kb downstream 10000 false Chr1: 29890180-29900179 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121510848 5273 Angiosperm View MSA
122368957 5261 Brassicaceae View MSA
123799690 5264 Brassicales-Malvales View MSA
124297184 5266 SBM View MSA
124149138 5268 Malvidae View MSA
123875003 5270 Rosid View MSA
123458891 5271 Pentapetalae View MSA
122494288 5272 Eudicot View MSA
120783923 5274 Embryophyte View MSA
123425782 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.335        
cufflinks 1.095        
cufflinks 0.226     Low Low
cufflinks 2.13       High
cufflinks 0.61        
cufflinks 1.081        

0 Strain