Gene : CK1 A. thaliana TAIR10
Primary Identifier:  ? AT1G71697 Defline:  (1 of 3) K14156 - choline/ethanolamine kinase (CHK)
Genomic Order:  6124 Name:  ? AT1G71697
Secondary Identifier:  ? PAC:19651743
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-3385 Arabidopsis thaliana pathologic  
Athaliana PWY4FS-6 Arabidopsis thaliana pathologic  

Genomics

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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G71697 0.5kb upstream 0.5kb upstream 2742 true Chr1: 26970723-26973464 Arabidopsis thaliana
AT1G71697 0.5kb upstream 0.5kb upstream 500 false Chr1: 26970723-26971222 Arabidopsis thaliana
AT1G71697 0.5kb downstream 0.5kb downstream 2742 true Chr1: 26971223-26973964 Arabidopsis thaliana
AT1G71697 0.5kb downstream 0.5kb downstream 500 false Chr1: 26973465-26973964 Arabidopsis thaliana
AT1G71697 1.0kb upstream 1.0kb upstream 3242 true Chr1: 26970223-26973464 Arabidopsis thaliana
AT1G71697 1.0kb upstream 1.0kb upstream 1000 false Chr1: 26970223-26971222 Arabidopsis thaliana
AT1G71697 1.0kb downstream 1.0kb downstream 3242 true Chr1: 26971223-26974464 Arabidopsis thaliana
AT1G71697 1.0kb downstream 1.0kb downstream 1000 false Chr1: 26973465-26974464 Arabidopsis thaliana
AT1G71697 2.0kb upstream 2.0kb upstream 4242 true Chr1: 26969223-26973464 Arabidopsis thaliana
AT1G71697 2.0kb upstream 2.0kb upstream 2000 false Chr1: 26969223-26971222 Arabidopsis thaliana
AT1G71697 2.0kb downstream 2.0kb downstream 4242 true Chr1: 26971223-26975464 Arabidopsis thaliana
AT1G71697 2.0kb downstream 2.0kb downstream 2000 false Chr1: 26973465-26975464 Arabidopsis thaliana
AT1G71697 5.0kb upstream 5.0kb upstream 7242 true Chr1: 26966223-26973464 Arabidopsis thaliana
AT1G71697 5.0kb upstream 5.0kb upstream 5000 false Chr1: 26966223-26971222 Arabidopsis thaliana
AT1G71697 5.0kb downstream 5.0kb downstream 7242 true Chr1: 26971223-26978464 Arabidopsis thaliana
AT1G71697 5.0kb downstream 5.0kb downstream 5000 false Chr1: 26973465-26978464 Arabidopsis thaliana
AT1G71697 10.0kb upstream 10.0kb upstream 12242 true Chr1: 26961223-26973464 Arabidopsis thaliana
AT1G71697 10.0kb upstream 10.0kb upstream 10000 false Chr1: 26961223-26971222 Arabidopsis thaliana
AT1G71697 10.0kb downstream 10.0kb downstream 12242 true Chr1: 26971223-26983464 Arabidopsis thaliana
AT1G71697 10.0kb downstream 10.0kb downstream 10000 false Chr1: 26973465-26983464 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363118 5261 Brassicaceae View MSA
123840519 5264 Brassicales-Malvales View MSA
124340711 5266 SBM View MSA
124247486 5268 Malvidae View MSA
124069180 5270 Rosid View MSA
123746925 5271 Pentapetalae View MSA
122797485 5272 Eudicot View MSA
122047896 5273 Angiosperm View MSA
121347088 5274 Embryophyte View MSA
123426626 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.504        
cufflinks 27.791        
cufflinks 10.249       Low
cufflinks 23.485        
cufflinks 10.702       Low
cufflinks 28.536       High

0 Strain