Gene : SERK1 A. thaliana TAIR10
Primary Identifier:  ? AT1G71830 Defline:  (1 of 2) K13418 - somatic embryogenesis receptor kinase 1 [EC:2.7.10.1 2.7.11.1] (SERK1)
Genomic Order:  6137 Name:  ? AT1G71830
Secondary Identifier:  ? PAC:19652224
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G71830 0.5kb upstream 0.5kb upstream 4460 true Chr1: 27017658-27022117 Arabidopsis thaliana
AT1G71830 0.5kb upstream 0.5kb upstream 500 false Chr1: 27017658-27018157 Arabidopsis thaliana
AT1G71830 0.5kb downstream 0.5kb downstream 4460 true Chr1: 27018158-27022617 Arabidopsis thaliana
AT1G71830 0.5kb downstream 0.5kb downstream 500 false Chr1: 27022118-27022617 Arabidopsis thaliana
AT1G71830 1.0kb upstream 1.0kb upstream 4960 true Chr1: 27017158-27022117 Arabidopsis thaliana
AT1G71830 1.0kb upstream 1.0kb upstream 1000 false Chr1: 27017158-27018157 Arabidopsis thaliana
AT1G71830 1.0kb downstream 1.0kb downstream 4960 true Chr1: 27018158-27023117 Arabidopsis thaliana
AT1G71830 1.0kb downstream 1.0kb downstream 1000 false Chr1: 27022118-27023117 Arabidopsis thaliana
AT1G71830 2.0kb upstream 2.0kb upstream 5960 true Chr1: 27016158-27022117 Arabidopsis thaliana
AT1G71830 2.0kb upstream 2.0kb upstream 2000 false Chr1: 27016158-27018157 Arabidopsis thaliana
AT1G71830 2.0kb downstream 2.0kb downstream 5960 true Chr1: 27018158-27024117 Arabidopsis thaliana
AT1G71830 2.0kb downstream 2.0kb downstream 2000 false Chr1: 27022118-27024117 Arabidopsis thaliana
AT1G71830 5.0kb upstream 5.0kb upstream 8960 true Chr1: 27013158-27022117 Arabidopsis thaliana
AT1G71830 5.0kb upstream 5.0kb upstream 5000 false Chr1: 27013158-27018157 Arabidopsis thaliana
AT1G71830 5.0kb downstream 5.0kb downstream 8960 true Chr1: 27018158-27027117 Arabidopsis thaliana
AT1G71830 5.0kb downstream 5.0kb downstream 5000 false Chr1: 27022118-27027117 Arabidopsis thaliana
AT1G71830 10.0kb upstream 10.0kb upstream 13960 true Chr1: 27008158-27022117 Arabidopsis thaliana
AT1G71830 10.0kb upstream 10.0kb upstream 10000 false Chr1: 27008158-27018157 Arabidopsis thaliana
AT1G71830 10.0kb downstream 10.0kb downstream 13960 true Chr1: 27018158-27032117 Arabidopsis thaliana
AT1G71830 10.0kb downstream 10.0kb downstream 10000 false Chr1: 27022118-27032117 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377871 5261 Brassicaceae View MSA
123829030 5264 Brassicales-Malvales View MSA
124336657 5266 SBM View MSA
124247779 5268 Malvidae View MSA
124066472 5270 Rosid View MSA
123747114 5271 Pentapetalae View MSA
122791131 5272 Eudicot View MSA
122044955 5273 Angiosperm View MSA
121346126 5274 Embryophyte View MSA
123427996 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.473        
cufflinks 8.618        
cufflinks 0.995       Low
cufflinks 8.821        
cufflinks 0.959       Low
cufflinks 10.586       High

0 Strain