Gene : AT1G72890 A. thaliana TAIR10
Defline:  (1 of 21) PTHR11017:SF169 - DISEASE RESISTANCE PROTEIN-RELATED Genomic Order:  6247
Name:  ? AT1G72890 Secondary Identifier:  ? PAC:19649260
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G72890 0.5kb upstream 0.5kb upstream 2545 true Chr1: 27429416-27431960 Arabidopsis thaliana
AT1G72890 0.5kb upstream 0.5kb upstream 500 false Chr1: 27429416-27429915 Arabidopsis thaliana
AT1G72890 0.5kb downstream 0.5kb downstream 2545 true Chr1: 27429916-27432460 Arabidopsis thaliana
AT1G72890 0.5kb downstream 0.5kb downstream 500 false Chr1: 27431961-27432460 Arabidopsis thaliana
AT1G72890 1.0kb upstream 1.0kb upstream 3045 true Chr1: 27428916-27431960 Arabidopsis thaliana
AT1G72890 1.0kb upstream 1.0kb upstream 1000 false Chr1: 27428916-27429915 Arabidopsis thaliana
AT1G72890 1.0kb downstream 1.0kb downstream 3045 true Chr1: 27429916-27432960 Arabidopsis thaliana
AT1G72890 1.0kb downstream 1.0kb downstream 1000 false Chr1: 27431961-27432960 Arabidopsis thaliana
AT1G72890 2.0kb upstream 2.0kb upstream 4045 true Chr1: 27427916-27431960 Arabidopsis thaliana
AT1G72890 2.0kb upstream 2.0kb upstream 2000 false Chr1: 27427916-27429915 Arabidopsis thaliana
AT1G72890 2.0kb downstream 2.0kb downstream 4045 true Chr1: 27429916-27433960 Arabidopsis thaliana
AT1G72890 2.0kb downstream 2.0kb downstream 2000 false Chr1: 27431961-27433960 Arabidopsis thaliana
AT1G72890 5.0kb upstream 5.0kb upstream 7045 true Chr1: 27424916-27431960 Arabidopsis thaliana
AT1G72890 5.0kb upstream 5.0kb upstream 5000 false Chr1: 27424916-27429915 Arabidopsis thaliana
AT1G72890 5.0kb downstream 5.0kb downstream 7045 true Chr1: 27429916-27436960 Arabidopsis thaliana
AT1G72890 5.0kb downstream 5.0kb downstream 5000 false Chr1: 27431961-27436960 Arabidopsis thaliana
AT1G72890 10.0kb upstream 10.0kb upstream 12045 true Chr1: 27419916-27431960 Arabidopsis thaliana
AT1G72890 10.0kb upstream 10.0kb upstream 10000 false Chr1: 27419916-27429915 Arabidopsis thaliana
AT1G72890 10.0kb downstream 10.0kb downstream 12045 true Chr1: 27429916-27441960 Arabidopsis thaliana
AT1G72890 10.0kb downstream 10.0kb downstream 10000 false Chr1: 27431961-27441960 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361445 5261 Brassicaceae View MSA
123798174 5264 Brassicales-Malvales View MSA
124295846 5266 SBM View MSA
124254426 5268 Malvidae View MSA
124074947 5270 Rosid View MSA
123753572 5271 Pentapetalae View MSA
122797897 5272 Eudicot View MSA
122051706 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.624       High
cufflinks 3.001        
cufflinks 3.843        
cufflinks 2.259       Low
cufflinks 4.442        
cufflinks 2.826        

0 Strain