Gene : TUA4 A. thaliana TAIR10
Primary Identifier:  ? AT1G04820 Defline:  (1 of 2) PTHR11588//PTHR11588:SF101 - TUBULIN // TUBULIN ALPHA-2 CHAIN-RELATED
Genomic Order:  401 Name:  ? AT1G04820
Secondary Identifier:  ? PAC:19650410
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G04820 0.5kb upstream 0.5kb upstream 2696 true Chr1: 1356191-1358886 Arabidopsis thaliana
AT1G04820 0.5kb upstream 0.5kb upstream 500 false Chr1: 1358387-1358886 Arabidopsis thaliana
AT1G04820 0.5kb downstream 0.5kb downstream 2696 true Chr1: 1355691-1358386 Arabidopsis thaliana
AT1G04820 0.5kb downstream 0.5kb downstream 500 false Chr1: 1355691-1356190 Arabidopsis thaliana
AT1G04820 1.0kb upstream 1.0kb upstream 3196 true Chr1: 1356191-1359386 Arabidopsis thaliana
AT1G04820 1.0kb upstream 1.0kb upstream 1000 false Chr1: 1358387-1359386 Arabidopsis thaliana
AT1G04820 1.0kb downstream 1.0kb downstream 3196 true Chr1: 1355191-1358386 Arabidopsis thaliana
AT1G04820 1.0kb downstream 1.0kb downstream 1000 false Chr1: 1355191-1356190 Arabidopsis thaliana
AT1G04820 2.0kb upstream 2.0kb upstream 4196 true Chr1: 1356191-1360386 Arabidopsis thaliana
AT1G04820 2.0kb upstream 2.0kb upstream 2000 false Chr1: 1358387-1360386 Arabidopsis thaliana
AT1G04820 2.0kb downstream 2.0kb downstream 4196 true Chr1: 1354191-1358386 Arabidopsis thaliana
AT1G04820 2.0kb downstream 2.0kb downstream 2000 false Chr1: 1354191-1356190 Arabidopsis thaliana
AT1G04820 5.0kb upstream 5.0kb upstream 7196 true Chr1: 1356191-1363386 Arabidopsis thaliana
AT1G04820 5.0kb upstream 5.0kb upstream 5000 false Chr1: 1358387-1363386 Arabidopsis thaliana
AT1G04820 5.0kb downstream 5.0kb downstream 7196 true Chr1: 1351191-1358386 Arabidopsis thaliana
AT1G04820 5.0kb downstream 5.0kb downstream 5000 false Chr1: 1351191-1356190 Arabidopsis thaliana
AT1G04820 10.0kb upstream 10.0kb upstream 12196 true Chr1: 1356191-1368386 Arabidopsis thaliana
AT1G04820 10.0kb upstream 10.0kb upstream 10000 false Chr1: 1358387-1368386 Arabidopsis thaliana
AT1G04820 10.0kb downstream 10.0kb downstream 12196 true Chr1: 1346191-1358386 Arabidopsis thaliana
AT1G04820 10.0kb downstream 10.0kb downstream 10000 false Chr1: 1346191-1356190 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379043 5261 Brassicaceae View MSA
123839138 5264 Brassicales-Malvales View MSA
124345220 5266 SBM View MSA
124253767 5268 Malvidae View MSA
124071842 5270 Rosid View MSA
123746760 5271 Pentapetalae View MSA
122797273 5272 Eudicot View MSA
122048269 5273 Angiosperm View MSA
121350767 5274 Embryophyte View MSA
123424087 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 164.128     High  
cufflinks 280.25     High  
cufflinks 125.369     High  
cufflinks 303.383     High  
cufflinks 93.697     High Low
cufflinks 430.974     High High

0 Strain