Gene : AT1G79950 A. thaliana TAIR10
Defline:  (1 of 1) K11136 - regulator of telomere elongation helicase 1 [EC:3.6.4.12] (RTEL1) Genomic Order:  6973
Name:  ? AT1G79950 Secondary Identifier:  ? PAC:19655731
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G79950 0.5kb upstream 0.5kb upstream 6458 true Chr1: 30073080-30079537 Arabidopsis thaliana
AT1G79950 0.5kb upstream 0.5kb upstream 500 false Chr1: 30073080-30073579 Arabidopsis thaliana
AT1G79950 0.5kb downstream 0.5kb downstream 6458 true Chr1: 30073580-30080037 Arabidopsis thaliana
AT1G79950 0.5kb downstream 0.5kb downstream 500 false Chr1: 30079538-30080037 Arabidopsis thaliana
AT1G79950 1.0kb upstream 1.0kb upstream 6958 true Chr1: 30072580-30079537 Arabidopsis thaliana
AT1G79950 1.0kb upstream 1.0kb upstream 1000 false Chr1: 30072580-30073579 Arabidopsis thaliana
AT1G79950 1.0kb downstream 1.0kb downstream 6958 true Chr1: 30073580-30080537 Arabidopsis thaliana
AT1G79950 1.0kb downstream 1.0kb downstream 1000 false Chr1: 30079538-30080537 Arabidopsis thaliana
AT1G79950 2.0kb upstream 2.0kb upstream 7958 true Chr1: 30071580-30079537 Arabidopsis thaliana
AT1G79950 2.0kb upstream 2.0kb upstream 2000 false Chr1: 30071580-30073579 Arabidopsis thaliana
AT1G79950 2.0kb downstream 2.0kb downstream 7958 true Chr1: 30073580-30081537 Arabidopsis thaliana
AT1G79950 2.0kb downstream 2.0kb downstream 2000 false Chr1: 30079538-30081537 Arabidopsis thaliana
AT1G79950 5.0kb upstream 5.0kb upstream 10958 true Chr1: 30068580-30079537 Arabidopsis thaliana
AT1G79950 5.0kb upstream 5.0kb upstream 5000 false Chr1: 30068580-30073579 Arabidopsis thaliana
AT1G79950 5.0kb downstream 5.0kb downstream 10958 true Chr1: 30073580-30084537 Arabidopsis thaliana
AT1G79950 5.0kb downstream 5.0kb downstream 5000 false Chr1: 30079538-30084537 Arabidopsis thaliana
AT1G79950 10.0kb upstream 10.0kb upstream 15958 true Chr1: 30063580-30079537 Arabidopsis thaliana
AT1G79950 10.0kb upstream 10.0kb upstream 10000 false Chr1: 30063580-30073579 Arabidopsis thaliana
AT1G79950 10.0kb downstream 10.0kb downstream 15958 true Chr1: 30073580-30089537 Arabidopsis thaliana
AT1G79950 10.0kb downstream 10.0kb downstream 10000 false Chr1: 30079538-30089537 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368360 5261 Brassicaceae View MSA
123833643 5264 Brassicales-Malvales View MSA
124338851 5266 SBM View MSA
124243483 5268 Malvidae View MSA
124073363 5270 Rosid View MSA
123739603 5271 Pentapetalae View MSA
122790875 5272 Eudicot View MSA
122044733 5273 Angiosperm View MSA
121346490 5274 Embryophyte View MSA
123426390 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.445        
cufflinks 9.509       High
cufflinks 4.567        
cufflinks 8.563        
cufflinks 4.299       Low
cufflinks 7.064        

0 Strain