Gene : TPX2 A. thaliana TAIR10
Primary Identifier:  ? AT1G65970 Defline:  (1 of 4) K03386 - peroxiredoxin (alkyl hydroperoxide reductase subunit C) [EC:1.11.1.15] (E1.11.1.15, PRDX, ahpC)
Genomic Order:  5527 Name:  ? AT1G65970
Secondary Identifier:  ? PAC:19653389
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G65970 0.5kb upstream 0.5kb upstream 1451 true Chr1: 24557372-24558822 Arabidopsis thaliana
AT1G65970 0.5kb upstream 0.5kb upstream 500 false Chr1: 24558323-24558822 Arabidopsis thaliana
AT1G65970 0.5kb downstream 0.5kb downstream 1451 true Chr1: 24556872-24558322 Arabidopsis thaliana
AT1G65970 0.5kb downstream 0.5kb downstream 500 false Chr1: 24556872-24557371 Arabidopsis thaliana
AT1G65970 1.0kb upstream 1.0kb upstream 1951 true Chr1: 24557372-24559322 Arabidopsis thaliana
AT1G65970 1.0kb upstream 1.0kb upstream 1000 false Chr1: 24558323-24559322 Arabidopsis thaliana
AT1G65970 1.0kb downstream 1.0kb downstream 1951 true Chr1: 24556372-24558322 Arabidopsis thaliana
AT1G65970 1.0kb downstream 1.0kb downstream 1000 false Chr1: 24556372-24557371 Arabidopsis thaliana
AT1G65970 2.0kb upstream 2.0kb upstream 2951 true Chr1: 24557372-24560322 Arabidopsis thaliana
AT1G65970 2.0kb upstream 2.0kb upstream 2000 false Chr1: 24558323-24560322 Arabidopsis thaliana
AT1G65970 2.0kb downstream 2.0kb downstream 2951 true Chr1: 24555372-24558322 Arabidopsis thaliana
AT1G65970 2.0kb downstream 2.0kb downstream 2000 false Chr1: 24555372-24557371 Arabidopsis thaliana
AT1G65970 5.0kb upstream 5.0kb upstream 5951 true Chr1: 24557372-24563322 Arabidopsis thaliana
AT1G65970 5.0kb upstream 5.0kb upstream 5000 false Chr1: 24558323-24563322 Arabidopsis thaliana
AT1G65970 5.0kb downstream 5.0kb downstream 5951 true Chr1: 24552372-24558322 Arabidopsis thaliana
AT1G65970 5.0kb downstream 5.0kb downstream 5000 false Chr1: 24552372-24557371 Arabidopsis thaliana
AT1G65970 10.0kb upstream 10.0kb upstream 10951 true Chr1: 24557372-24568322 Arabidopsis thaliana
AT1G65970 10.0kb upstream 10.0kb upstream 10000 false Chr1: 24558323-24568322 Arabidopsis thaliana
AT1G65970 10.0kb downstream 10.0kb downstream 10951 true Chr1: 24547372-24558322 Arabidopsis thaliana
AT1G65970 10.0kb downstream 10.0kb downstream 10000 false Chr1: 24547372-24557371 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122338444 5261 Brassicaceae View MSA
123779019 5264 Brassicales-Malvales View MSA
124277353 5266 SBM View MSA
124132563 5268 Malvidae View MSA
124062788 5270 Rosid View MSA
123743941 5271 Pentapetalae View MSA
122794597 5272 Eudicot View MSA
122042116 5273 Angiosperm View MSA
121349933 5274 Embryophyte View MSA
123427314 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.572       Low
cufflinks 6.72        
cufflinks 17.482       High
cufflinks 6.56        
cufflinks 17.652       High
cufflinks 4.037        

0 Strain