Gene : CAK4 A. thaliana TAIR10
Primary Identifier:  ? AT1G66750 Defline:  (1 of 3) K02202 - cyclin-dependent kinase 7 (CDK7)
Genomic Order:  5611 Name:  ? AT1G66750
Secondary Identifier:  ? PAC:19655559
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5 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G66750 0.5kb upstream 0.5kb upstream 3039 true Chr1: 24894215-24897253 Arabidopsis thaliana
AT1G66750 0.5kb upstream 0.5kb upstream 500 false Chr1: 24894215-24894714 Arabidopsis thaliana
AT1G66750 0.5kb downstream 0.5kb downstream 3039 true Chr1: 24894715-24897753 Arabidopsis thaliana
AT1G66750 0.5kb downstream 0.5kb downstream 500 false Chr1: 24897254-24897753 Arabidopsis thaliana
AT1G66750 1.0kb upstream 1.0kb upstream 3539 true Chr1: 24893715-24897253 Arabidopsis thaliana
AT1G66750 1.0kb upstream 1.0kb upstream 1000 false Chr1: 24893715-24894714 Arabidopsis thaliana
AT1G66750 1.0kb downstream 1.0kb downstream 3539 true Chr1: 24894715-24898253 Arabidopsis thaliana
AT1G66750 1.0kb downstream 1.0kb downstream 1000 false Chr1: 24897254-24898253 Arabidopsis thaliana
AT1G66750 2.0kb upstream 2.0kb upstream 4539 true Chr1: 24892715-24897253 Arabidopsis thaliana
AT1G66750 2.0kb upstream 2.0kb upstream 2000 false Chr1: 24892715-24894714 Arabidopsis thaliana
AT1G66750 2.0kb downstream 2.0kb downstream 4539 true Chr1: 24894715-24899253 Arabidopsis thaliana
AT1G66750 2.0kb downstream 2.0kb downstream 2000 false Chr1: 24897254-24899253 Arabidopsis thaliana
AT1G66750 5.0kb upstream 5.0kb upstream 7539 true Chr1: 24889715-24897253 Arabidopsis thaliana
AT1G66750 5.0kb upstream 5.0kb upstream 5000 false Chr1: 24889715-24894714 Arabidopsis thaliana
AT1G66750 5.0kb downstream 5.0kb downstream 7539 true Chr1: 24894715-24902253 Arabidopsis thaliana
AT1G66750 5.0kb downstream 5.0kb downstream 5000 false Chr1: 24897254-24902253 Arabidopsis thaliana
AT1G66750 10.0kb upstream 10.0kb upstream 12539 true Chr1: 24884715-24897253 Arabidopsis thaliana
AT1G66750 10.0kb upstream 10.0kb upstream 10000 false Chr1: 24884715-24894714 Arabidopsis thaliana
AT1G66750 10.0kb downstream 10.0kb downstream 12539 true Chr1: 24894715-24907253 Arabidopsis thaliana
AT1G66750 10.0kb downstream 10.0kb downstream 10000 false Chr1: 24897254-24907253 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121672845 5273 Angiosperm View MSA
122370632 5261 Brassicaceae View MSA
123800005 5264 Brassicales-Malvales View MSA
124297467 5266 SBM View MSA
124149350 5268 Malvidae View MSA
124068928 5270 Rosid View MSA
123627863 5271 Pentapetalae View MSA
122662203 5272 Eudicot View MSA
120944753 5274 Embryophyte View MSA
123426711 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.311        
cufflinks 6.955       High
cufflinks 3.942       Low
cufflinks 6.812        
cufflinks 4.369        
cufflinks 6.547        

0 Strain