Gene : AT1G68580 A. thaliana TAIR10
Defline:  (1 of 3) PTHR31917//PTHR31917:SF9 - FAMILY NOT NAMED // AGENET DOMAIN-CONTAINING PROTEIN / BROMO-ADJACENT HOMOLOGY (BAH) DOMAIN-CONTAINING PROTEIN Genomic Order:  5808
Name:  ? AT1G68580 Secondary Identifier:  ? PAC:19651558
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G68580 0.5kb upstream 0.5kb upstream 3842 true Chr1: 25752235-25756076 Arabidopsis thaliana
AT1G68580 0.5kb upstream 0.5kb upstream 500 false Chr1: 25752235-25752734 Arabidopsis thaliana
AT1G68580 0.5kb downstream 0.5kb downstream 3842 true Chr1: 25752735-25756576 Arabidopsis thaliana
AT1G68580 0.5kb downstream 0.5kb downstream 500 false Chr1: 25756077-25756576 Arabidopsis thaliana
AT1G68580 1.0kb upstream 1.0kb upstream 4342 true Chr1: 25751735-25756076 Arabidopsis thaliana
AT1G68580 1.0kb upstream 1.0kb upstream 1000 false Chr1: 25751735-25752734 Arabidopsis thaliana
AT1G68580 1.0kb downstream 1.0kb downstream 4342 true Chr1: 25752735-25757076 Arabidopsis thaliana
AT1G68580 1.0kb downstream 1.0kb downstream 1000 false Chr1: 25756077-25757076 Arabidopsis thaliana
AT1G68580 2.0kb upstream 2.0kb upstream 5342 true Chr1: 25750735-25756076 Arabidopsis thaliana
AT1G68580 2.0kb upstream 2.0kb upstream 2000 false Chr1: 25750735-25752734 Arabidopsis thaliana
AT1G68580 2.0kb downstream 2.0kb downstream 5342 true Chr1: 25752735-25758076 Arabidopsis thaliana
AT1G68580 2.0kb downstream 2.0kb downstream 2000 false Chr1: 25756077-25758076 Arabidopsis thaliana
AT1G68580 5.0kb upstream 5.0kb upstream 8342 true Chr1: 25747735-25756076 Arabidopsis thaliana
AT1G68580 5.0kb upstream 5.0kb upstream 5000 false Chr1: 25747735-25752734 Arabidopsis thaliana
AT1G68580 5.0kb downstream 5.0kb downstream 8342 true Chr1: 25752735-25761076 Arabidopsis thaliana
AT1G68580 5.0kb downstream 5.0kb downstream 5000 false Chr1: 25756077-25761076 Arabidopsis thaliana
AT1G68580 10.0kb upstream 10.0kb upstream 13342 true Chr1: 25742735-25756076 Arabidopsis thaliana
AT1G68580 10.0kb upstream 10.0kb upstream 10000 false Chr1: 25742735-25752734 Arabidopsis thaliana
AT1G68580 10.0kb downstream 10.0kb downstream 13342 true Chr1: 25752735-25766076 Arabidopsis thaliana
AT1G68580 10.0kb downstream 10.0kb downstream 10000 false Chr1: 25756077-25766076 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373475 5261 Brassicaceae View MSA
123840978 5264 Brassicales-Malvales View MSA
124341895 5266 SBM View MSA
124238237 5268 Malvidae View MSA
124073290 5270 Rosid View MSA
123738159 5271 Pentapetalae View MSA
122792230 5272 Eudicot View MSA
122049413 5273 Angiosperm View MSA
121349027 5274 Embryophyte View MSA
123381130 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.795        
cufflinks 14.566        
cufflinks 12.429       Low
cufflinks 16.488        
cufflinks 12.342       Low
cufflinks 17.552       High

0 Strain