Gene : AT1G64430 A. thaliana TAIR10
Defline:  Pentatricopeptide repeat (PPR) superfamily protein Genomic Order:  5364
Name:  ? AT1G64430 Secondary Identifier:  ? PAC:19657381
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G64430 0.5kb upstream 0.5kb upstream 3988 true Chr1: 23932880-23936867 Arabidopsis thaliana
AT1G64430 0.5kb upstream 0.5kb upstream 500 false Chr1: 23932880-23933379 Arabidopsis thaliana
AT1G64430 0.5kb downstream 0.5kb downstream 3988 true Chr1: 23933380-23937367 Arabidopsis thaliana
AT1G64430 0.5kb downstream 0.5kb downstream 500 false Chr1: 23936868-23937367 Arabidopsis thaliana
AT1G64430 1.0kb upstream 1.0kb upstream 4488 true Chr1: 23932380-23936867 Arabidopsis thaliana
AT1G64430 1.0kb upstream 1.0kb upstream 1000 false Chr1: 23932380-23933379 Arabidopsis thaliana
AT1G64430 1.0kb downstream 1.0kb downstream 4488 true Chr1: 23933380-23937867 Arabidopsis thaliana
AT1G64430 1.0kb downstream 1.0kb downstream 1000 false Chr1: 23936868-23937867 Arabidopsis thaliana
AT1G64430 2.0kb upstream 2.0kb upstream 5488 true Chr1: 23931380-23936867 Arabidopsis thaliana
AT1G64430 2.0kb upstream 2.0kb upstream 2000 false Chr1: 23931380-23933379 Arabidopsis thaliana
AT1G64430 2.0kb downstream 2.0kb downstream 5488 true Chr1: 23933380-23938867 Arabidopsis thaliana
AT1G64430 2.0kb downstream 2.0kb downstream 2000 false Chr1: 23936868-23938867 Arabidopsis thaliana
AT1G64430 5.0kb upstream 5.0kb upstream 8488 true Chr1: 23928380-23936867 Arabidopsis thaliana
AT1G64430 5.0kb upstream 5.0kb upstream 5000 false Chr1: 23928380-23933379 Arabidopsis thaliana
AT1G64430 5.0kb downstream 5.0kb downstream 8488 true Chr1: 23933380-23941867 Arabidopsis thaliana
AT1G64430 5.0kb downstream 5.0kb downstream 5000 false Chr1: 23936868-23941867 Arabidopsis thaliana
AT1G64430 10.0kb upstream 10.0kb upstream 13488 true Chr1: 23923380-23936867 Arabidopsis thaliana
AT1G64430 10.0kb upstream 10.0kb upstream 10000 false Chr1: 23923380-23933379 Arabidopsis thaliana
AT1G64430 10.0kb downstream 10.0kb downstream 13488 true Chr1: 23933380-23946867 Arabidopsis thaliana
AT1G64430 10.0kb downstream 10.0kb downstream 10000 false Chr1: 23936868-23946867 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363604 5261 Brassicaceae View MSA
123829022 5264 Brassicales-Malvales View MSA
124336831 5266 SBM View MSA
124248100 5268 Malvidae View MSA
124066809 5270 Rosid View MSA
123736501 5271 Pentapetalae View MSA
122790212 5272 Eudicot View MSA
122042268 5273 Angiosperm View MSA
121347908 5274 Embryophyte View MSA
123425074 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.268        
cufflinks 1.536        
cufflinks 9.006        
cufflinks 1.382        
cufflinks 7.773        
cufflinks 1.13       Low

0 Strain