Gene : TLP10 A. thaliana TAIR10
Primary Identifier:  ? AT1G25280 Defline:  (1 of 3) PTHR16517//PTHR16517:SF31 - TUBBY-RELATED // TUBBY-LIKE F-BOX PROTEIN 1-RELATED
Genomic Order:  2536 Name:  ? AT1G25280
Secondary Identifier:  ? PAC:19652675
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G25280 0.5kb upstream 0.5kb upstream 3529 true Chr1: 8863277-8866805 Arabidopsis thaliana
AT1G25280 0.5kb upstream 0.5kb upstream 500 false Chr1: 8863277-8863776 Arabidopsis thaliana
AT1G25280 0.5kb downstream 0.5kb downstream 3529 true Chr1: 8863777-8867305 Arabidopsis thaliana
AT1G25280 0.5kb downstream 0.5kb downstream 500 false Chr1: 8866806-8867305 Arabidopsis thaliana
AT1G25280 1.0kb upstream 1.0kb upstream 4029 true Chr1: 8862777-8866805 Arabidopsis thaliana
AT1G25280 1.0kb upstream 1.0kb upstream 1000 false Chr1: 8862777-8863776 Arabidopsis thaliana
AT1G25280 1.0kb downstream 1.0kb downstream 4029 true Chr1: 8863777-8867805 Arabidopsis thaliana
AT1G25280 1.0kb downstream 1.0kb downstream 1000 false Chr1: 8866806-8867805 Arabidopsis thaliana
AT1G25280 2.0kb upstream 2.0kb upstream 5029 true Chr1: 8861777-8866805 Arabidopsis thaliana
AT1G25280 2.0kb upstream 2.0kb upstream 2000 false Chr1: 8861777-8863776 Arabidopsis thaliana
AT1G25280 2.0kb downstream 2.0kb downstream 5029 true Chr1: 8863777-8868805 Arabidopsis thaliana
AT1G25280 2.0kb downstream 2.0kb downstream 2000 false Chr1: 8866806-8868805 Arabidopsis thaliana
AT1G25280 5.0kb upstream 5.0kb upstream 8029 true Chr1: 8858777-8866805 Arabidopsis thaliana
AT1G25280 5.0kb upstream 5.0kb upstream 5000 false Chr1: 8858777-8863776 Arabidopsis thaliana
AT1G25280 5.0kb downstream 5.0kb downstream 8029 true Chr1: 8863777-8871805 Arabidopsis thaliana
AT1G25280 5.0kb downstream 5.0kb downstream 5000 false Chr1: 8866806-8871805 Arabidopsis thaliana
AT1G25280 10.0kb upstream 10.0kb upstream 13029 true Chr1: 8853777-8866805 Arabidopsis thaliana
AT1G25280 10.0kb upstream 10.0kb upstream 10000 false Chr1: 8853777-8863776 Arabidopsis thaliana
AT1G25280 10.0kb downstream 10.0kb downstream 13029 true Chr1: 8863777-8876805 Arabidopsis thaliana
AT1G25280 10.0kb downstream 10.0kb downstream 10000 false Chr1: 8866806-8876805 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373478 5261 Brassicaceae View MSA
123840746 5264 Brassicales-Malvales View MSA
124339333 5266 SBM View MSA
124250508 5268 Malvidae View MSA
124068448 5270 Rosid View MSA
123743171 5271 Pentapetalae View MSA
122786446 5272 Eudicot View MSA
122044327 5273 Angiosperm View MSA
123429062 5275 Viridiplantae View MSA
121348967 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.208        
cufflinks 6.126        
cufflinks 3.6       Low
cufflinks 6.924       High
cufflinks 4.432        
cufflinks 6.578        

0 Strain