Gene : AT1G27595 A. thaliana TAIR10
Defline:  (1 of 1) PTHR15245:SF20 - SYMPLEKIN Genomic Order:  2738
Name:  ? AT1G27595 Secondary Identifier:  ? PAC:19651761
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G27595 0.5kb upstream 0.5kb upstream 7396 true Chr1: 9595860-9603255 Arabidopsis thaliana
AT1G27595 0.5kb upstream 0.5kb upstream 500 false Chr1: 9595860-9596359 Arabidopsis thaliana
AT1G27595 0.5kb downstream 0.5kb downstream 7396 true Chr1: 9596360-9603755 Arabidopsis thaliana
AT1G27595 0.5kb downstream 0.5kb downstream 500 false Chr1: 9603256-9603755 Arabidopsis thaliana
AT1G27595 1.0kb upstream 1.0kb upstream 7896 true Chr1: 9595360-9603255 Arabidopsis thaliana
AT1G27595 1.0kb upstream 1.0kb upstream 1000 false Chr1: 9595360-9596359 Arabidopsis thaliana
AT1G27595 1.0kb downstream 1.0kb downstream 7896 true Chr1: 9596360-9604255 Arabidopsis thaliana
AT1G27595 1.0kb downstream 1.0kb downstream 1000 false Chr1: 9603256-9604255 Arabidopsis thaliana
AT1G27595 2.0kb upstream 2.0kb upstream 8896 true Chr1: 9594360-9603255 Arabidopsis thaliana
AT1G27595 2.0kb upstream 2.0kb upstream 2000 false Chr1: 9594360-9596359 Arabidopsis thaliana
AT1G27595 2.0kb downstream 2.0kb downstream 8896 true Chr1: 9596360-9605255 Arabidopsis thaliana
AT1G27595 2.0kb downstream 2.0kb downstream 2000 false Chr1: 9603256-9605255 Arabidopsis thaliana
AT1G27595 5.0kb upstream 5.0kb upstream 11896 true Chr1: 9591360-9603255 Arabidopsis thaliana
AT1G27595 5.0kb upstream 5.0kb upstream 5000 false Chr1: 9591360-9596359 Arabidopsis thaliana
AT1G27595 5.0kb downstream 5.0kb downstream 11896 true Chr1: 9596360-9608255 Arabidopsis thaliana
AT1G27595 5.0kb downstream 5.0kb downstream 5000 false Chr1: 9603256-9608255 Arabidopsis thaliana
AT1G27595 10.0kb upstream 10.0kb upstream 16896 true Chr1: 9586360-9603255 Arabidopsis thaliana
AT1G27595 10.0kb upstream 10.0kb upstream 10000 false Chr1: 9586360-9596359 Arabidopsis thaliana
AT1G27595 10.0kb downstream 10.0kb downstream 16896 true Chr1: 9596360-9613255 Arabidopsis thaliana
AT1G27595 10.0kb downstream 10.0kb downstream 10000 false Chr1: 9603256-9613255 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122328539 5261 Brassicaceae Singleton cluster - no MSA
123837013 5264 Brassicales-Malvales View MSA
124343067 5266 SBM View MSA
124246771 5268 Malvidae View MSA
124064902 5270 Rosid View MSA
123745431 5271 Pentapetalae View MSA
122791448 5272 Eudicot View MSA
122046301 5273 Angiosperm View MSA
121344612 5274 Embryophyte View MSA
123424208 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.76        
cufflinks 8.102        
cufflinks 4.053        
cufflinks 8.806       High
cufflinks 3.887       Low
cufflinks 7.99        

0 Strain