Gene : AT1G27570 A. thaliana TAIR10
Defline:  (1 of 2) PTHR15245:SF26 - PHOSPHATIDYLINOSITOL 3-AND 4-KINASE-LIKE PROTEIN Genomic Order:  2735
Name:  ? AT1G27570 Secondary Identifier:  ? PAC:19657021
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-6351 Arabidopsis thaliana pathologic  
Athaliana PWY-6352 Arabidopsis thaliana pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G27570 0.5kb upstream 0.5kb upstream 7339 true Chr1: 9575038-9582376 Arabidopsis thaliana
AT1G27570 0.5kb upstream 0.5kb upstream 500 false Chr1: 9575038-9575537 Arabidopsis thaliana
AT1G27570 0.5kb downstream 0.5kb downstream 7339 true Chr1: 9575538-9582876 Arabidopsis thaliana
AT1G27570 0.5kb downstream 0.5kb downstream 500 false Chr1: 9582377-9582876 Arabidopsis thaliana
AT1G27570 1.0kb upstream 1.0kb upstream 7839 true Chr1: 9574538-9582376 Arabidopsis thaliana
AT1G27570 1.0kb upstream 1.0kb upstream 1000 false Chr1: 9574538-9575537 Arabidopsis thaliana
AT1G27570 1.0kb downstream 1.0kb downstream 7839 true Chr1: 9575538-9583376 Arabidopsis thaliana
AT1G27570 1.0kb downstream 1.0kb downstream 1000 false Chr1: 9582377-9583376 Arabidopsis thaliana
AT1G27570 2.0kb upstream 2.0kb upstream 8839 true Chr1: 9573538-9582376 Arabidopsis thaliana
AT1G27570 2.0kb upstream 2.0kb upstream 2000 false Chr1: 9573538-9575537 Arabidopsis thaliana
AT1G27570 2.0kb downstream 2.0kb downstream 8839 true Chr1: 9575538-9584376 Arabidopsis thaliana
AT1G27570 2.0kb downstream 2.0kb downstream 2000 false Chr1: 9582377-9584376 Arabidopsis thaliana
AT1G27570 5.0kb upstream 5.0kb upstream 11839 true Chr1: 9570538-9582376 Arabidopsis thaliana
AT1G27570 5.0kb upstream 5.0kb upstream 5000 false Chr1: 9570538-9575537 Arabidopsis thaliana
AT1G27570 5.0kb downstream 5.0kb downstream 11839 true Chr1: 9575538-9587376 Arabidopsis thaliana
AT1G27570 5.0kb downstream 5.0kb downstream 5000 false Chr1: 9582377-9587376 Arabidopsis thaliana
AT1G27570 10.0kb upstream 10.0kb upstream 16839 true Chr1: 9565538-9582376 Arabidopsis thaliana
AT1G27570 10.0kb upstream 10.0kb upstream 10000 false Chr1: 9565538-9575537 Arabidopsis thaliana
AT1G27570 10.0kb downstream 10.0kb downstream 16839 true Chr1: 9575538-9592376 Arabidopsis thaliana
AT1G27570 10.0kb downstream 10.0kb downstream 10000 false Chr1: 9582377-9592376 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121493579 5273 Angiosperm Singleton cluster - no MSA
122328988 5261 Brassicaceae Singleton cluster - no MSA
123770311 5264 Brassicales-Malvales Singleton cluster - no MSA
124268853 5266 SBM Singleton cluster - no MSA
124125026 5268 Malvidae Singleton cluster - no MSA
123854020 5270 Rosid Singleton cluster - no MSA
123440053 5271 Pentapetalae Singleton cluster - no MSA
122475643 5272 Eudicot Singleton cluster - no MSA
120766953 5274 Embryophyte Singleton cluster - no MSA
122809351 5275 Viridiplantae Singleton cluster - no MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain