Gene : MYB52 A. thaliana TAIR10
Primary Identifier:  ? AT1G17950 Defline:  (1 of 2) PTHR10641:SF665 - MYB TRANSCRIPTION FACTOR
Genomic Order:  1808 Name:  ? AT1G17950
Secondary Identifier:  ? PAC:19653448
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0 Pathways

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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G17950 0.5kb upstream 0.5kb upstream 2173 true Chr1: 6177117-6179289 Arabidopsis thaliana
AT1G17950 0.5kb upstream 0.5kb upstream 500 false Chr1: 6177117-6177616 Arabidopsis thaliana
AT1G17950 0.5kb downstream 0.5kb downstream 2173 true Chr1: 6177617-6179789 Arabidopsis thaliana
AT1G17950 0.5kb downstream 0.5kb downstream 500 false Chr1: 6179290-6179789 Arabidopsis thaliana
AT1G17950 1.0kb upstream 1.0kb upstream 2673 true Chr1: 6176617-6179289 Arabidopsis thaliana
AT1G17950 1.0kb upstream 1.0kb upstream 1000 false Chr1: 6176617-6177616 Arabidopsis thaliana
AT1G17950 1.0kb downstream 1.0kb downstream 2673 true Chr1: 6177617-6180289 Arabidopsis thaliana
AT1G17950 1.0kb downstream 1.0kb downstream 1000 false Chr1: 6179290-6180289 Arabidopsis thaliana
AT1G17950 2.0kb upstream 2.0kb upstream 3673 true Chr1: 6175617-6179289 Arabidopsis thaliana
AT1G17950 2.0kb upstream 2.0kb upstream 2000 false Chr1: 6175617-6177616 Arabidopsis thaliana
AT1G17950 2.0kb downstream 2.0kb downstream 3673 true Chr1: 6177617-6181289 Arabidopsis thaliana
AT1G17950 2.0kb downstream 2.0kb downstream 2000 false Chr1: 6179290-6181289 Arabidopsis thaliana
AT1G17950 5.0kb upstream 5.0kb upstream 6673 true Chr1: 6172617-6179289 Arabidopsis thaliana
AT1G17950 5.0kb upstream 5.0kb upstream 5000 false Chr1: 6172617-6177616 Arabidopsis thaliana
AT1G17950 5.0kb downstream 5.0kb downstream 6673 true Chr1: 6177617-6184289 Arabidopsis thaliana
AT1G17950 5.0kb downstream 5.0kb downstream 5000 false Chr1: 6179290-6184289 Arabidopsis thaliana
AT1G17950 10.0kb upstream 10.0kb upstream 11673 true Chr1: 6167617-6179289 Arabidopsis thaliana
AT1G17950 10.0kb upstream 10.0kb upstream 10000 false Chr1: 6167617-6177616 Arabidopsis thaliana
AT1G17950 10.0kb downstream 10.0kb downstream 11673 true Chr1: 6177617-6189289 Arabidopsis thaliana
AT1G17950 10.0kb downstream 10.0kb downstream 10000 false Chr1: 6179290-6189289 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375441 5261 Brassicaceae View MSA
123840498 5264 Brassicales-Malvales View MSA
124346263 5266 SBM View MSA
124250274 5268 Malvidae View MSA
124070030 5270 Rosid View MSA
123748583 5271 Pentapetalae View MSA
122795051 5272 Eudicot View MSA
122048858 5273 Angiosperm View MSA
123429079 5275 Viridiplantae View MSA
121351453 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.061     Low  
cufflinks 1.53        
cufflinks 0.054     Low  
cufflinks 2.638       High
cufflinks 0.058     Low  
cufflinks 2.457        

0 Strain