Gene : AT1G20260 A. thaliana TAIR10
Defline:  (1 of 3) K02147 - V-type H+-transporting ATPase subunit B (ATPeV1B, ATP6B) Genomic Order:  2038
Name:  ? AT1G20260 Secondary Identifier:  ? PAC:19657474
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G20260 0.5kb upstream 0.5kb upstream 4398 true Chr1: 7016193-7020590 Arabidopsis thaliana
AT1G20260 0.5kb upstream 0.5kb upstream 500 false Chr1: 7016193-7016692 Arabidopsis thaliana
AT1G20260 0.5kb downstream 0.5kb downstream 4398 true Chr1: 7016693-7021090 Arabidopsis thaliana
AT1G20260 0.5kb downstream 0.5kb downstream 500 false Chr1: 7020591-7021090 Arabidopsis thaliana
AT1G20260 1.0kb upstream 1.0kb upstream 4898 true Chr1: 7015693-7020590 Arabidopsis thaliana
AT1G20260 1.0kb upstream 1.0kb upstream 1000 false Chr1: 7015693-7016692 Arabidopsis thaliana
AT1G20260 1.0kb downstream 1.0kb downstream 4898 true Chr1: 7016693-7021590 Arabidopsis thaliana
AT1G20260 1.0kb downstream 1.0kb downstream 1000 false Chr1: 7020591-7021590 Arabidopsis thaliana
AT1G20260 2.0kb upstream 2.0kb upstream 5898 true Chr1: 7014693-7020590 Arabidopsis thaliana
AT1G20260 2.0kb upstream 2.0kb upstream 2000 false Chr1: 7014693-7016692 Arabidopsis thaliana
AT1G20260 2.0kb downstream 2.0kb downstream 5898 true Chr1: 7016693-7022590 Arabidopsis thaliana
AT1G20260 2.0kb downstream 2.0kb downstream 2000 false Chr1: 7020591-7022590 Arabidopsis thaliana
AT1G20260 5.0kb upstream 5.0kb upstream 8898 true Chr1: 7011693-7020590 Arabidopsis thaliana
AT1G20260 5.0kb upstream 5.0kb upstream 5000 false Chr1: 7011693-7016692 Arabidopsis thaliana
AT1G20260 5.0kb downstream 5.0kb downstream 8898 true Chr1: 7016693-7025590 Arabidopsis thaliana
AT1G20260 5.0kb downstream 5.0kb downstream 5000 false Chr1: 7020591-7025590 Arabidopsis thaliana
AT1G20260 10.0kb upstream 10.0kb upstream 13898 true Chr1: 7006693-7020590 Arabidopsis thaliana
AT1G20260 10.0kb upstream 10.0kb upstream 10000 false Chr1: 7006693-7016692 Arabidopsis thaliana
AT1G20260 10.0kb downstream 10.0kb downstream 13898 true Chr1: 7016693-7030590 Arabidopsis thaliana
AT1G20260 10.0kb downstream 10.0kb downstream 10000 false Chr1: 7020591-7030590 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364277 5261 Brassicaceae View MSA
123798721 5264 Brassicales-Malvales View MSA
124296322 5266 SBM View MSA
124248961 5268 Malvidae View MSA
124071392 5270 Rosid View MSA
123743480 5271 Pentapetalae View MSA
122794276 5272 Eudicot View MSA
122046157 5273 Angiosperm View MSA
121350179 5274 Embryophyte View MSA
123423759 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 56.074     High High
cufflinks 33.027     High Low
cufflinks 51.891     High  
cufflinks 38.465     High  
cufflinks 50.405     High  
cufflinks 41.634     High  

0 Strain