Gene : AT1G21160 A. thaliana TAIR10
Defline:  (1 of 4) K03243 - translation initiation factor 5B (EIF5B) Genomic Order:  2133
Name:  ? AT1G21160 Secondary Identifier:  ? PAC:19651953
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G21160 0.5kb upstream 0.5kb upstream 5403 true Chr1: 7407955-7413357 Arabidopsis thaliana
AT1G21160 0.5kb upstream 0.5kb upstream 500 false Chr1: 7412858-7413357 Arabidopsis thaliana
AT1G21160 0.5kb downstream 0.5kb downstream 5403 true Chr1: 7407455-7412857 Arabidopsis thaliana
AT1G21160 0.5kb downstream 0.5kb downstream 500 false Chr1: 7407455-7407954 Arabidopsis thaliana
AT1G21160 1.0kb upstream 1.0kb upstream 5903 true Chr1: 7407955-7413857 Arabidopsis thaliana
AT1G21160 1.0kb upstream 1.0kb upstream 1000 false Chr1: 7412858-7413857 Arabidopsis thaliana
AT1G21160 1.0kb downstream 1.0kb downstream 5903 true Chr1: 7406955-7412857 Arabidopsis thaliana
AT1G21160 1.0kb downstream 1.0kb downstream 1000 false Chr1: 7406955-7407954 Arabidopsis thaliana
AT1G21160 2.0kb upstream 2.0kb upstream 6903 true Chr1: 7407955-7414857 Arabidopsis thaliana
AT1G21160 2.0kb upstream 2.0kb upstream 2000 false Chr1: 7412858-7414857 Arabidopsis thaliana
AT1G21160 2.0kb downstream 2.0kb downstream 6903 true Chr1: 7405955-7412857 Arabidopsis thaliana
AT1G21160 2.0kb downstream 2.0kb downstream 2000 false Chr1: 7405955-7407954 Arabidopsis thaliana
AT1G21160 5.0kb upstream 5.0kb upstream 9903 true Chr1: 7407955-7417857 Arabidopsis thaliana
AT1G21160 5.0kb upstream 5.0kb upstream 5000 false Chr1: 7412858-7417857 Arabidopsis thaliana
AT1G21160 5.0kb downstream 5.0kb downstream 9903 true Chr1: 7402955-7412857 Arabidopsis thaliana
AT1G21160 5.0kb downstream 5.0kb downstream 5000 false Chr1: 7402955-7407954 Arabidopsis thaliana
AT1G21160 10.0kb upstream 10.0kb upstream 14903 true Chr1: 7407955-7422857 Arabidopsis thaliana
AT1G21160 10.0kb upstream 10.0kb upstream 10000 false Chr1: 7412858-7422857 Arabidopsis thaliana
AT1G21160 10.0kb downstream 10.0kb downstream 14903 true Chr1: 7397955-7412857 Arabidopsis thaliana
AT1G21160 10.0kb downstream 10.0kb downstream 10000 false Chr1: 7397955-7407954 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121511889 5273 Angiosperm View MSA
122379368 5261 Brassicaceae View MSA
123802229 5264 Brassicales-Malvales View MSA
124299441 5266 SBM View MSA
124150855 5268 Malvidae View MSA
123876399 5270 Rosid View MSA
123460081 5271 Pentapetalae View MSA
122495460 5272 Eudicot View MSA
120784916 5274 Embryophyte View MSA
123428388 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.72        
cufflinks 9.521       High
cufflinks 7.605        
cufflinks 9.322       High
cufflinks 7.646        
cufflinks 7.665        

0 Strain