Gene : AT1G21630 A. thaliana TAIR10
Defline:  (1 of 1) PTHR11216//PTHR11216:SF61//PTHR11216:SF72 - EH DOMAIN // GH06923P // CALCIUM-BINDING EF HAND-CONTAINING PROTEIN Genomic Order:  2179
Name:  ? AT1G21630 Secondary Identifier:  ? PAC:19650320
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G21630 0.5kb upstream 0.5kb upstream 7568 true Chr1: 7580584-7588151 Arabidopsis thaliana
AT1G21630 0.5kb upstream 0.5kb upstream 500 false Chr1: 7580584-7581083 Arabidopsis thaliana
AT1G21630 0.5kb downstream 0.5kb downstream 7568 true Chr1: 7581084-7588651 Arabidopsis thaliana
AT1G21630 0.5kb downstream 0.5kb downstream 500 false Chr1: 7588152-7588651 Arabidopsis thaliana
AT1G21630 1.0kb upstream 1.0kb upstream 8068 true Chr1: 7580084-7588151 Arabidopsis thaliana
AT1G21630 1.0kb upstream 1.0kb upstream 1000 false Chr1: 7580084-7581083 Arabidopsis thaliana
AT1G21630 1.0kb downstream 1.0kb downstream 8068 true Chr1: 7581084-7589151 Arabidopsis thaliana
AT1G21630 1.0kb downstream 1.0kb downstream 1000 false Chr1: 7588152-7589151 Arabidopsis thaliana
AT1G21630 2.0kb upstream 2.0kb upstream 9068 true Chr1: 7579084-7588151 Arabidopsis thaliana
AT1G21630 2.0kb upstream 2.0kb upstream 2000 false Chr1: 7579084-7581083 Arabidopsis thaliana
AT1G21630 2.0kb downstream 2.0kb downstream 9068 true Chr1: 7581084-7590151 Arabidopsis thaliana
AT1G21630 2.0kb downstream 2.0kb downstream 2000 false Chr1: 7588152-7590151 Arabidopsis thaliana
AT1G21630 5.0kb upstream 5.0kb upstream 12068 true Chr1: 7576084-7588151 Arabidopsis thaliana
AT1G21630 5.0kb upstream 5.0kb upstream 5000 false Chr1: 7576084-7581083 Arabidopsis thaliana
AT1G21630 5.0kb downstream 5.0kb downstream 12068 true Chr1: 7581084-7593151 Arabidopsis thaliana
AT1G21630 5.0kb downstream 5.0kb downstream 5000 false Chr1: 7588152-7593151 Arabidopsis thaliana
AT1G21630 10.0kb upstream 10.0kb upstream 17068 true Chr1: 7571084-7588151 Arabidopsis thaliana
AT1G21630 10.0kb upstream 10.0kb upstream 10000 false Chr1: 7571084-7581083 Arabidopsis thaliana
AT1G21630 10.0kb downstream 10.0kb downstream 17068 true Chr1: 7581084-7598151 Arabidopsis thaliana
AT1G21630 10.0kb downstream 10.0kb downstream 10000 false Chr1: 7588152-7598151 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375756 5261 Brassicaceae View MSA
123840175 5264 Brassicales-Malvales View MSA
124339695 5266 SBM View MSA
124251840 5268 Malvidae View MSA
124067152 5270 Rosid View MSA
123746825 5271 Pentapetalae View MSA
122791981 5272 Eudicot View MSA
122047031 5273 Angiosperm View MSA
121346987 5274 Embryophyte View MSA
123426341 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.927        
cufflinks 9.952        
cufflinks 7.465       Low
cufflinks 11.628        
cufflinks 8.474        
cufflinks 12.956       High

0 Strain