Gene : AT1G21660 A. thaliana TAIR10
Defline:  (1 of 7) PTHR23172 - AUXILIN/CYCLIN G-ASSOCIATED KINASE-RELATED Genomic Order:  2183
Name:  ? AT1G21660 Secondary Identifier:  ? PAC:19653815
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G21660 0.5kb upstream 0.5kb upstream 3867 true Chr1: 7605199-7609065 Arabidopsis thaliana
AT1G21660 0.5kb upstream 0.5kb upstream 500 false Chr1: 7605199-7605698 Arabidopsis thaliana
AT1G21660 0.5kb downstream 0.5kb downstream 3867 true Chr1: 7605699-7609565 Arabidopsis thaliana
AT1G21660 0.5kb downstream 0.5kb downstream 500 false Chr1: 7609066-7609565 Arabidopsis thaliana
AT1G21660 1.0kb upstream 1.0kb upstream 4367 true Chr1: 7604699-7609065 Arabidopsis thaliana
AT1G21660 1.0kb upstream 1.0kb upstream 1000 false Chr1: 7604699-7605698 Arabidopsis thaliana
AT1G21660 1.0kb downstream 1.0kb downstream 4367 true Chr1: 7605699-7610065 Arabidopsis thaliana
AT1G21660 1.0kb downstream 1.0kb downstream 1000 false Chr1: 7609066-7610065 Arabidopsis thaliana
AT1G21660 2.0kb upstream 2.0kb upstream 5367 true Chr1: 7603699-7609065 Arabidopsis thaliana
AT1G21660 2.0kb upstream 2.0kb upstream 2000 false Chr1: 7603699-7605698 Arabidopsis thaliana
AT1G21660 2.0kb downstream 2.0kb downstream 5367 true Chr1: 7605699-7611065 Arabidopsis thaliana
AT1G21660 2.0kb downstream 2.0kb downstream 2000 false Chr1: 7609066-7611065 Arabidopsis thaliana
AT1G21660 5.0kb upstream 5.0kb upstream 8367 true Chr1: 7600699-7609065 Arabidopsis thaliana
AT1G21660 5.0kb upstream 5.0kb upstream 5000 false Chr1: 7600699-7605698 Arabidopsis thaliana
AT1G21660 5.0kb downstream 5.0kb downstream 8367 true Chr1: 7605699-7614065 Arabidopsis thaliana
AT1G21660 5.0kb downstream 5.0kb downstream 5000 false Chr1: 7609066-7614065 Arabidopsis thaliana
AT1G21660 10.0kb upstream 10.0kb upstream 13367 true Chr1: 7595699-7609065 Arabidopsis thaliana
AT1G21660 10.0kb upstream 10.0kb upstream 10000 false Chr1: 7595699-7605698 Arabidopsis thaliana
AT1G21660 10.0kb downstream 10.0kb downstream 13367 true Chr1: 7605699-7619065 Arabidopsis thaliana
AT1G21660 10.0kb downstream 10.0kb downstream 10000 false Chr1: 7609066-7619065 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364224 5261 Brassicaceae View MSA
123833603 5264 Brassicales-Malvales View MSA
124343145 5266 SBM View MSA
124250821 5268 Malvidae View MSA
124071289 5270 Rosid View MSA
123751066 5271 Pentapetalae View MSA
122796666 5272 Eudicot View MSA
122049551 5273 Angiosperm View MSA
121311468 5274 Embryophyte View MSA
123426248 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.126        
cufflinks 22.444        
cufflinks 12.084        
cufflinks 22.405        
cufflinks 11.128       Low
cufflinks 25.29       High

0 Strain