Gene : TLP6 A. thaliana TAIR10
Primary Identifier:  ? AT1G47270 Defline:  (1 of 1) PTHR16517:SF41 - TUBBY-LIKE F-BOX PROTEIN 6
Genomic Order:  3750 Name:  ? AT1G47270
Secondary Identifier:  ? PAC:19652700
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G47270 0.5kb upstream 0.5kb upstream 2673 true Chr1: 17326056-17328728 Arabidopsis thaliana
AT1G47270 0.5kb upstream 0.5kb upstream 500 false Chr1: 17326056-17326555 Arabidopsis thaliana
AT1G47270 0.5kb downstream 0.5kb downstream 2673 true Chr1: 17326556-17329228 Arabidopsis thaliana
AT1G47270 0.5kb downstream 0.5kb downstream 500 false Chr1: 17328729-17329228 Arabidopsis thaliana
AT1G47270 1.0kb upstream 1.0kb upstream 3173 true Chr1: 17325556-17328728 Arabidopsis thaliana
AT1G47270 1.0kb upstream 1.0kb upstream 1000 false Chr1: 17325556-17326555 Arabidopsis thaliana
AT1G47270 1.0kb downstream 1.0kb downstream 3173 true Chr1: 17326556-17329728 Arabidopsis thaliana
AT1G47270 1.0kb downstream 1.0kb downstream 1000 false Chr1: 17328729-17329728 Arabidopsis thaliana
AT1G47270 2.0kb upstream 2.0kb upstream 4173 true Chr1: 17324556-17328728 Arabidopsis thaliana
AT1G47270 2.0kb upstream 2.0kb upstream 2000 false Chr1: 17324556-17326555 Arabidopsis thaliana
AT1G47270 2.0kb downstream 2.0kb downstream 4173 true Chr1: 17326556-17330728 Arabidopsis thaliana
AT1G47270 2.0kb downstream 2.0kb downstream 2000 false Chr1: 17328729-17330728 Arabidopsis thaliana
AT1G47270 5.0kb upstream 5.0kb upstream 7173 true Chr1: 17321556-17328728 Arabidopsis thaliana
AT1G47270 5.0kb upstream 5.0kb upstream 5000 false Chr1: 17321556-17326555 Arabidopsis thaliana
AT1G47270 5.0kb downstream 5.0kb downstream 7173 true Chr1: 17326556-17333728 Arabidopsis thaliana
AT1G47270 5.0kb downstream 5.0kb downstream 5000 false Chr1: 17328729-17333728 Arabidopsis thaliana
AT1G47270 10.0kb upstream 10.0kb upstream 12173 true Chr1: 17316556-17328728 Arabidopsis thaliana
AT1G47270 10.0kb upstream 10.0kb upstream 10000 false Chr1: 17316556-17326555 Arabidopsis thaliana
AT1G47270 10.0kb downstream 10.0kb downstream 12173 true Chr1: 17326556-17338728 Arabidopsis thaliana
AT1G47270 10.0kb downstream 10.0kb downstream 10000 false Chr1: 17328729-17338728 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365415 5261 Brassicaceae View MSA
123834979 5264 Brassicales-Malvales View MSA
124340093 5266 SBM View MSA
124250646 5268 Malvidae View MSA
124063202 5270 Rosid View MSA
123747341 5271 Pentapetalae View MSA
122790799 5272 Eudicot View MSA
122049170 5273 Angiosperm View MSA
123429062 5275 Viridiplantae View MSA
121348967 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.654       High
cufflinks 4.617       High
cufflinks 3.929        
cufflinks 4.206        
cufflinks 3.594       Low
cufflinks 4.055        

0 Strain