Gene : ATPI4K ALPHA A. thaliana TAIR10
Primary Identifier:  ? AT1G49340 Defline:  (1 of 3) K00888 - phosphatidylinositol 4-kinase (PI4K)
Genomic Order:  3961 Name:  ? AT1G49340
Secondary Identifier:  ? PAC:19656348
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Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-6351 Arabidopsis thaliana pathologic  
Athaliana PWY-6352 Arabidopsis thaliana pathologic  

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G49340 0.5kb upstream 0.5kb upstream 12608 true Chr1: 18251855-18264462 Arabidopsis thaliana
AT1G49340 0.5kb upstream 0.5kb upstream 500 false Chr1: 18251855-18252354 Arabidopsis thaliana
AT1G49340 0.5kb downstream 0.5kb downstream 12608 true Chr1: 18252355-18264962 Arabidopsis thaliana
AT1G49340 0.5kb downstream 0.5kb downstream 500 false Chr1: 18264463-18264962 Arabidopsis thaliana
AT1G49340 1.0kb upstream 1.0kb upstream 13108 true Chr1: 18251355-18264462 Arabidopsis thaliana
AT1G49340 1.0kb upstream 1.0kb upstream 1000 false Chr1: 18251355-18252354 Arabidopsis thaliana
AT1G49340 1.0kb downstream 1.0kb downstream 13108 true Chr1: 18252355-18265462 Arabidopsis thaliana
AT1G49340 1.0kb downstream 1.0kb downstream 1000 false Chr1: 18264463-18265462 Arabidopsis thaliana
AT1G49340 2.0kb upstream 2.0kb upstream 14108 true Chr1: 18250355-18264462 Arabidopsis thaliana
AT1G49340 2.0kb upstream 2.0kb upstream 2000 false Chr1: 18250355-18252354 Arabidopsis thaliana
AT1G49340 2.0kb downstream 2.0kb downstream 14108 true Chr1: 18252355-18266462 Arabidopsis thaliana
AT1G49340 2.0kb downstream 2.0kb downstream 2000 false Chr1: 18264463-18266462 Arabidopsis thaliana
AT1G49340 5.0kb upstream 5.0kb upstream 17108 true Chr1: 18247355-18264462 Arabidopsis thaliana
AT1G49340 5.0kb upstream 5.0kb upstream 5000 false Chr1: 18247355-18252354 Arabidopsis thaliana
AT1G49340 5.0kb downstream 5.0kb downstream 17108 true Chr1: 18252355-18269462 Arabidopsis thaliana
AT1G49340 5.0kb downstream 5.0kb downstream 5000 false Chr1: 18264463-18269462 Arabidopsis thaliana
AT1G49340 10.0kb upstream 10.0kb upstream 22108 true Chr1: 18242355-18264462 Arabidopsis thaliana
AT1G49340 10.0kb upstream 10.0kb upstream 10000 false Chr1: 18242355-18252354 Arabidopsis thaliana
AT1G49340 10.0kb downstream 10.0kb downstream 22108 true Chr1: 18252355-18274462 Arabidopsis thaliana
AT1G49340 10.0kb downstream 10.0kb downstream 10000 false Chr1: 18264463-18274462 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375944 5261 Brassicaceae View MSA
123830290 5264 Brassicales-Malvales View MSA
124339642 5266 SBM View MSA
124245083 5268 Malvidae View MSA
124067399 5270 Rosid View MSA
123753673 5271 Pentapetalae View MSA
122789670 5272 Eudicot View MSA
122046398 5273 Angiosperm View MSA
121350852 5274 Embryophyte View MSA
123425493 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.401        
cufflinks 4.644        
cufflinks 3.228        
cufflinks 5.254        
cufflinks 3.192        
cufflinks 5.521       High

0 Strain