Gene : AT1G28600 A. thaliana TAIR10
Defline:  (1 of 14) 3.1.1.49 - Sinapine esterase Genomic Order:  2847
Name:  ? AT1G28600 Secondary Identifier:  ? PAC:19656161
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-3301 Arabidopsis thaliana pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G28600 0.5kb upstream 0.5kb upstream 2617 true Chr1: 10051001-10053617 Arabidopsis thaliana
AT1G28600 0.5kb upstream 0.5kb upstream 500 false Chr1: 10053118-10053617 Arabidopsis thaliana
AT1G28600 0.5kb downstream 0.5kb downstream 2617 true Chr1: 10050501-10053117 Arabidopsis thaliana
AT1G28600 0.5kb downstream 0.5kb downstream 500 false Chr1: 10050501-10051000 Arabidopsis thaliana
AT1G28600 1.0kb upstream 1.0kb upstream 3117 true Chr1: 10051001-10054117 Arabidopsis thaliana
AT1G28600 1.0kb upstream 1.0kb upstream 1000 false Chr1: 10053118-10054117 Arabidopsis thaliana
AT1G28600 1.0kb downstream 1.0kb downstream 3117 true Chr1: 10050001-10053117 Arabidopsis thaliana
AT1G28600 1.0kb downstream 1.0kb downstream 1000 false Chr1: 10050001-10051000 Arabidopsis thaliana
AT1G28600 2.0kb upstream 2.0kb upstream 4117 true Chr1: 10051001-10055117 Arabidopsis thaliana
AT1G28600 2.0kb upstream 2.0kb upstream 2000 false Chr1: 10053118-10055117 Arabidopsis thaliana
AT1G28600 2.0kb downstream 2.0kb downstream 4117 true Chr1: 10049001-10053117 Arabidopsis thaliana
AT1G28600 2.0kb downstream 2.0kb downstream 2000 false Chr1: 10049001-10051000 Arabidopsis thaliana
AT1G28600 5.0kb upstream 5.0kb upstream 7117 true Chr1: 10051001-10058117 Arabidopsis thaliana
AT1G28600 5.0kb upstream 5.0kb upstream 5000 false Chr1: 10053118-10058117 Arabidopsis thaliana
AT1G28600 5.0kb downstream 5.0kb downstream 7117 true Chr1: 10046001-10053117 Arabidopsis thaliana
AT1G28600 5.0kb downstream 5.0kb downstream 5000 false Chr1: 10046001-10051000 Arabidopsis thaliana
AT1G28600 10.0kb upstream 10.0kb upstream 12117 true Chr1: 10051001-10063117 Arabidopsis thaliana
AT1G28600 10.0kb upstream 10.0kb upstream 10000 false Chr1: 10053118-10063117 Arabidopsis thaliana
AT1G28600 10.0kb downstream 10.0kb downstream 12117 true Chr1: 10041001-10053117 Arabidopsis thaliana
AT1G28600 10.0kb downstream 10.0kb downstream 10000 false Chr1: 10041001-10051000 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122343617 5261 Brassicaceae View MSA
123841139 5264 Brassicales-Malvales View MSA
124349912 5266 SBM View MSA
124249732 5268 Malvidae View MSA
124068482 5270 Rosid View MSA
123752448 5271 Pentapetalae View MSA
122797509 5272 Eudicot View MSA
122051674 5273 Angiosperm View MSA
121351762 5274 Embryophyte View MSA
123428079 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.996       High
cufflinks 7.589       Low
cufflinks 15.028        
cufflinks 11.825        
cufflinks 12.894        
cufflinks 7.075       Low

0 Strain