Gene : AT1G30600 A. thaliana TAIR10
Defline:  (1 of 3) PTHR10795:SF439 - SERINE PROTEINASE-RELATED Genomic Order:  3027
Name:  ? AT1G30600 Secondary Identifier:  ? PAC:19655374
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G30600 0.5kb upstream 0.5kb upstream 4409 true Chr1: 10841142-10845550 Arabidopsis thaliana
AT1G30600 0.5kb upstream 0.5kb upstream 500 false Chr1: 10845051-10845550 Arabidopsis thaliana
AT1G30600 0.5kb downstream 0.5kb downstream 4409 true Chr1: 10840642-10845050 Arabidopsis thaliana
AT1G30600 0.5kb downstream 0.5kb downstream 500 false Chr1: 10840642-10841141 Arabidopsis thaliana
AT1G30600 1.0kb upstream 1.0kb upstream 4909 true Chr1: 10841142-10846050 Arabidopsis thaliana
AT1G30600 1.0kb upstream 1.0kb upstream 1000 false Chr1: 10845051-10846050 Arabidopsis thaliana
AT1G30600 1.0kb downstream 1.0kb downstream 4909 true Chr1: 10840142-10845050 Arabidopsis thaliana
AT1G30600 1.0kb downstream 1.0kb downstream 1000 false Chr1: 10840142-10841141 Arabidopsis thaliana
AT1G30600 2.0kb upstream 2.0kb upstream 5909 true Chr1: 10841142-10847050 Arabidopsis thaliana
AT1G30600 2.0kb upstream 2.0kb upstream 2000 false Chr1: 10845051-10847050 Arabidopsis thaliana
AT1G30600 2.0kb downstream 2.0kb downstream 5909 true Chr1: 10839142-10845050 Arabidopsis thaliana
AT1G30600 2.0kb downstream 2.0kb downstream 2000 false Chr1: 10839142-10841141 Arabidopsis thaliana
AT1G30600 5.0kb upstream 5.0kb upstream 8909 true Chr1: 10841142-10850050 Arabidopsis thaliana
AT1G30600 5.0kb upstream 5.0kb upstream 5000 false Chr1: 10845051-10850050 Arabidopsis thaliana
AT1G30600 5.0kb downstream 5.0kb downstream 8909 true Chr1: 10836142-10845050 Arabidopsis thaliana
AT1G30600 5.0kb downstream 5.0kb downstream 5000 false Chr1: 10836142-10841141 Arabidopsis thaliana
AT1G30600 10.0kb upstream 10.0kb upstream 13909 true Chr1: 10841142-10855050 Arabidopsis thaliana
AT1G30600 10.0kb upstream 10.0kb upstream 10000 false Chr1: 10845051-10855050 Arabidopsis thaliana
AT1G30600 10.0kb downstream 10.0kb downstream 13909 true Chr1: 10831142-10845050 Arabidopsis thaliana
AT1G30600 10.0kb downstream 10.0kb downstream 10000 false Chr1: 10831142-10841141 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121782576 5273 Angiosperm View MSA
122361926 5261 Brassicaceae View MSA
123798273 5264 Brassicales-Malvales View MSA
124295937 5266 SBM View MSA
124252306 5268 Malvidae View MSA
124039268 5270 Rosid View MSA
123753257 5271 Pentapetalae View MSA
122775017 5272 Eudicot View MSA
121054087 5274 Embryophyte View MSA
123094085 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.008        
cufflinks 13.108        
cufflinks 1.862        
cufflinks 12.31        
cufflinks 1.397       Low
cufflinks 15.862       High

0 Strain