Gene : AT1G30550 A. thaliana TAIR10
Defline:  (1 of 1) PTHR14741:SF32 - TRIMETHYLGUANOSINE SYNTHASE Genomic Order:  3022
Name:  ? AT1G30550 Secondary Identifier:  ? PAC:19649778
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G30550 0.5kb upstream 0.5kb upstream 4606 true Chr1: 10819554-10824159 Arabidopsis thaliana
AT1G30550 0.5kb upstream 0.5kb upstream 500 false Chr1: 10823660-10824159 Arabidopsis thaliana
AT1G30550 0.5kb downstream 0.5kb downstream 4606 true Chr1: 10819054-10823659 Arabidopsis thaliana
AT1G30550 0.5kb downstream 0.5kb downstream 500 false Chr1: 10819054-10819553 Arabidopsis thaliana
AT1G30550 1.0kb upstream 1.0kb upstream 5106 true Chr1: 10819554-10824659 Arabidopsis thaliana
AT1G30550 1.0kb upstream 1.0kb upstream 1000 false Chr1: 10823660-10824659 Arabidopsis thaliana
AT1G30550 1.0kb downstream 1.0kb downstream 5106 true Chr1: 10818554-10823659 Arabidopsis thaliana
AT1G30550 1.0kb downstream 1.0kb downstream 1000 false Chr1: 10818554-10819553 Arabidopsis thaliana
AT1G30550 2.0kb upstream 2.0kb upstream 6106 true Chr1: 10819554-10825659 Arabidopsis thaliana
AT1G30550 2.0kb upstream 2.0kb upstream 2000 false Chr1: 10823660-10825659 Arabidopsis thaliana
AT1G30550 2.0kb downstream 2.0kb downstream 6106 true Chr1: 10817554-10823659 Arabidopsis thaliana
AT1G30550 2.0kb downstream 2.0kb downstream 2000 false Chr1: 10817554-10819553 Arabidopsis thaliana
AT1G30550 5.0kb upstream 5.0kb upstream 9106 true Chr1: 10819554-10828659 Arabidopsis thaliana
AT1G30550 5.0kb upstream 5.0kb upstream 5000 false Chr1: 10823660-10828659 Arabidopsis thaliana
AT1G30550 5.0kb downstream 5.0kb downstream 9106 true Chr1: 10814554-10823659 Arabidopsis thaliana
AT1G30550 5.0kb downstream 5.0kb downstream 5000 false Chr1: 10814554-10819553 Arabidopsis thaliana
AT1G30550 10.0kb upstream 10.0kb upstream 14106 true Chr1: 10819554-10833659 Arabidopsis thaliana
AT1G30550 10.0kb upstream 10.0kb upstream 10000 false Chr1: 10823660-10833659 Arabidopsis thaliana
AT1G30550 10.0kb downstream 10.0kb downstream 14106 true Chr1: 10809554-10823659 Arabidopsis thaliana
AT1G30550 10.0kb downstream 10.0kb downstream 10000 false Chr1: 10809554-10819553 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121493157 5273 Angiosperm Singleton cluster - no MSA
122328385 5261 Brassicaceae Singleton cluster - no MSA
123769743 5264 Brassicales-Malvales Singleton cluster - no MSA
124268295 5266 SBM Singleton cluster - no MSA
124124509 5268 Malvidae Singleton cluster - no MSA
123853537 5270 Rosid Singleton cluster - no MSA
123439605 5271 Pentapetalae Singleton cluster - no MSA
122475199 5272 Eudicot Singleton cluster - no MSA
120766533 5274 Embryophyte Singleton cluster - no MSA
122808937 5275 Viridiplantae Singleton cluster - no MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.248        
cufflinks 1.852        
cufflinks 0.922       Low
cufflinks 2.367       High
cufflinks 0.866       Low
cufflinks 1.849        

0 Strain