Gene : HAC1 A. thaliana TAIR10
Primary Identifier:  ? AT1G79000 Defline:  (1 of 5) K04498 - E1A/CREB-binding protein (EP300, CREBBP, KAT3)
Genomic Order:  6881 Name:  ? AT1G79000
Secondary Identifier:  ? PAC:19652294
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G79000 0.5kb upstream 0.5kb upstream 8772 true Chr1: 29716350-29725121 Arabidopsis thaliana
AT1G79000 0.5kb upstream 0.5kb upstream 500 false Chr1: 29724622-29725121 Arabidopsis thaliana
AT1G79000 0.5kb downstream 0.5kb downstream 8772 true Chr1: 29715850-29724621 Arabidopsis thaliana
AT1G79000 0.5kb downstream 0.5kb downstream 500 false Chr1: 29715850-29716349 Arabidopsis thaliana
AT1G79000 1.0kb upstream 1.0kb upstream 9272 true Chr1: 29716350-29725621 Arabidopsis thaliana
AT1G79000 1.0kb upstream 1.0kb upstream 1000 false Chr1: 29724622-29725621 Arabidopsis thaliana
AT1G79000 1.0kb downstream 1.0kb downstream 9272 true Chr1: 29715350-29724621 Arabidopsis thaliana
AT1G79000 1.0kb downstream 1.0kb downstream 1000 false Chr1: 29715350-29716349 Arabidopsis thaliana
AT1G79000 2.0kb upstream 2.0kb upstream 10272 true Chr1: 29716350-29726621 Arabidopsis thaliana
AT1G79000 2.0kb upstream 2.0kb upstream 2000 false Chr1: 29724622-29726621 Arabidopsis thaliana
AT1G79000 2.0kb downstream 2.0kb downstream 10272 true Chr1: 29714350-29724621 Arabidopsis thaliana
AT1G79000 2.0kb downstream 2.0kb downstream 2000 false Chr1: 29714350-29716349 Arabidopsis thaliana
AT1G79000 5.0kb upstream 5.0kb upstream 13272 true Chr1: 29716350-29729621 Arabidopsis thaliana
AT1G79000 5.0kb upstream 5.0kb upstream 5000 false Chr1: 29724622-29729621 Arabidopsis thaliana
AT1G79000 5.0kb downstream 5.0kb downstream 13272 true Chr1: 29711350-29724621 Arabidopsis thaliana
AT1G79000 5.0kb downstream 5.0kb downstream 5000 false Chr1: 29711350-29716349 Arabidopsis thaliana
AT1G79000 10.0kb upstream 10.0kb upstream 18272 true Chr1: 29716350-29734621 Arabidopsis thaliana
AT1G79000 10.0kb upstream 10.0kb upstream 10000 false Chr1: 29724622-29734621 Arabidopsis thaliana
AT1G79000 10.0kb downstream 10.0kb downstream 18272 true Chr1: 29706350-29724621 Arabidopsis thaliana
AT1G79000 10.0kb downstream 10.0kb downstream 10000 false Chr1: 29706350-29716349 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376701 5261 Brassicaceae View MSA
123839846 5264 Brassicales-Malvales View MSA
124344458 5266 SBM View MSA
124238296 5268 Malvidae View MSA
124067227 5270 Rosid View MSA
123747259 5271 Pentapetalae View MSA
122789535 5272 Eudicot View MSA
122047201 5273 Angiosperm View MSA
121350917 5274 Embryophyte View MSA
123426645 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.225        
cufflinks 7.642        
cufflinks 5.194       Low
cufflinks 9.02       High
cufflinks 5.779        
cufflinks 7.42        

0 Strain