Gene : AT1G13460 A. thaliana TAIR10
Defline:  (1 of 3) PTHR10257//PTHR10257:SF26 - SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B // SERINE/THREONINE PROTEIN PHOSPHATASE 2A 55 KDA REGULATORY SUBUNIT B' DELTA ISOFORM Genomic Order:  1336
Name:  ? AT1G13460 Secondary Identifier:  ? PAC:19650798
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G13460 0.5kb upstream 0.5kb upstream 3017 true Chr1: 4615313-4618329 Arabidopsis thaliana
AT1G13460 0.5kb upstream 0.5kb upstream 500 false Chr1: 4615313-4615812 Arabidopsis thaliana
AT1G13460 0.5kb downstream 0.5kb downstream 3017 true Chr1: 4615813-4618829 Arabidopsis thaliana
AT1G13460 0.5kb downstream 0.5kb downstream 500 false Chr1: 4618330-4618829 Arabidopsis thaliana
AT1G13460 1.0kb upstream 1.0kb upstream 3517 true Chr1: 4614813-4618329 Arabidopsis thaliana
AT1G13460 1.0kb upstream 1.0kb upstream 1000 false Chr1: 4614813-4615812 Arabidopsis thaliana
AT1G13460 1.0kb downstream 1.0kb downstream 3517 true Chr1: 4615813-4619329 Arabidopsis thaliana
AT1G13460 1.0kb downstream 1.0kb downstream 1000 false Chr1: 4618330-4619329 Arabidopsis thaliana
AT1G13460 2.0kb upstream 2.0kb upstream 4517 true Chr1: 4613813-4618329 Arabidopsis thaliana
AT1G13460 2.0kb upstream 2.0kb upstream 2000 false Chr1: 4613813-4615812 Arabidopsis thaliana
AT1G13460 2.0kb downstream 2.0kb downstream 4517 true Chr1: 4615813-4620329 Arabidopsis thaliana
AT1G13460 2.0kb downstream 2.0kb downstream 2000 false Chr1: 4618330-4620329 Arabidopsis thaliana
AT1G13460 5.0kb upstream 5.0kb upstream 7517 true Chr1: 4610813-4618329 Arabidopsis thaliana
AT1G13460 5.0kb upstream 5.0kb upstream 5000 false Chr1: 4610813-4615812 Arabidopsis thaliana
AT1G13460 5.0kb downstream 5.0kb downstream 7517 true Chr1: 4615813-4623329 Arabidopsis thaliana
AT1G13460 5.0kb downstream 5.0kb downstream 5000 false Chr1: 4618330-4623329 Arabidopsis thaliana
AT1G13460 10.0kb upstream 10.0kb upstream 12517 true Chr1: 4605813-4618329 Arabidopsis thaliana
AT1G13460 10.0kb upstream 10.0kb upstream 10000 false Chr1: 4605813-4615812 Arabidopsis thaliana
AT1G13460 10.0kb downstream 10.0kb downstream 12517 true Chr1: 4615813-4628329 Arabidopsis thaliana
AT1G13460 10.0kb downstream 10.0kb downstream 10000 false Chr1: 4618330-4628329 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361218 5261 Brassicaceae View MSA
123836644 5264 Brassicales-Malvales View MSA
124345623 5266 SBM View MSA
124246599 5268 Malvidae View MSA
124065822 5270 Rosid View MSA
123746976 5271 Pentapetalae View MSA
122787217 5272 Eudicot View MSA
122044522 5273 Angiosperm View MSA
121346157 5274 Embryophyte View MSA
123427992 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.721        
cufflinks 4.4        
cufflinks 3.584       Low
cufflinks 4.648        
cufflinks 3.852        
cufflinks 4.462        

0 Strain