Gene : GAPA-2 A. thaliana TAIR10
Primary Identifier:  ? AT1G12900 Defline:  (1 of 2) 1.2.1.12//1.2.1.13 - Glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) / Triosephosphate dehydrogenase // Glyceraldehyde-3-phosphate dehydrogenase (NADP(+)) (phosphorylating) / Triosephosphate dehydrogenase (NADP+)
Genomic Order:  1280 Name:  ? AT1G12900
Secondary Identifier:  ? PAC:19655061
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Sequence Feature Displayer

Ontology Annotation Displayer

9 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana ANAEROFRUCAT-PWY Arabidopsis thaliana pathologic  
Athaliana ANAGLYCOLYSIS-PWY Arabidopsis thaliana pathologic  
Athaliana CALVIN-PWY Arabidopsis thaliana pathologic  
Athaliana GLUCONEO-PWY Arabidopsis thaliana pathologic  
Athaliana PHOTOALL-PWY Arabidopsis thaliana pathologic  
Athaliana PWY-1042 Arabidopsis thaliana pathologic  
Athaliana PWY-5464 Arabidopsis thaliana pathologic  
Athaliana PWY66-399 Arabidopsis thaliana pathologic  
Athaliana SUCSYN-PWY Arabidopsis thaliana pathologic  

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G12900 0.5kb upstream 0.5kb upstream 2451 true Chr1: 4392450-4394900 Arabidopsis thaliana
AT1G12900 0.5kb upstream 0.5kb upstream 500 false Chr1: 4394401-4394900 Arabidopsis thaliana
AT1G12900 0.5kb downstream 0.5kb downstream 2451 true Chr1: 4391950-4394400 Arabidopsis thaliana
AT1G12900 0.5kb downstream 0.5kb downstream 500 false Chr1: 4391950-4392449 Arabidopsis thaliana
AT1G12900 1.0kb upstream 1.0kb upstream 2951 true Chr1: 4392450-4395400 Arabidopsis thaliana
AT1G12900 1.0kb upstream 1.0kb upstream 1000 false Chr1: 4394401-4395400 Arabidopsis thaliana
AT1G12900 1.0kb downstream 1.0kb downstream 2951 true Chr1: 4391450-4394400 Arabidopsis thaliana
AT1G12900 1.0kb downstream 1.0kb downstream 1000 false Chr1: 4391450-4392449 Arabidopsis thaliana
AT1G12900 2.0kb upstream 2.0kb upstream 3951 true Chr1: 4392450-4396400 Arabidopsis thaliana
AT1G12900 2.0kb upstream 2.0kb upstream 2000 false Chr1: 4394401-4396400 Arabidopsis thaliana
AT1G12900 2.0kb downstream 2.0kb downstream 3951 true Chr1: 4390450-4394400 Arabidopsis thaliana
AT1G12900 2.0kb downstream 2.0kb downstream 2000 false Chr1: 4390450-4392449 Arabidopsis thaliana
AT1G12900 5.0kb upstream 5.0kb upstream 6951 true Chr1: 4392450-4399400 Arabidopsis thaliana
AT1G12900 5.0kb upstream 5.0kb upstream 5000 false Chr1: 4394401-4399400 Arabidopsis thaliana
AT1G12900 5.0kb downstream 5.0kb downstream 6951 true Chr1: 4387450-4394400 Arabidopsis thaliana
AT1G12900 5.0kb downstream 5.0kb downstream 5000 false Chr1: 4387450-4392449 Arabidopsis thaliana
AT1G12900 10.0kb upstream 10.0kb upstream 11951 true Chr1: 4392450-4404400 Arabidopsis thaliana
AT1G12900 10.0kb upstream 10.0kb upstream 10000 false Chr1: 4394401-4404400 Arabidopsis thaliana
AT1G12900 10.0kb downstream 10.0kb downstream 11951 true Chr1: 4382450-4394400 Arabidopsis thaliana
AT1G12900 10.0kb downstream 10.0kb downstream 10000 false Chr1: 4382450-4392449 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360412 5261 Brassicaceae View MSA
123837960 5264 Brassicales-Malvales View MSA
124344179 5266 SBM View MSA
124254162 5268 Malvidae View MSA
124061607 5270 Rosid View MSA
123737488 5271 Pentapetalae View MSA
122795007 5272 Eudicot View MSA
122045489 5273 Angiosperm View MSA
121346351 5274 Embryophyte View MSA
123425156 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 176.609     High  
cufflinks 0.19     Low  
cufflinks 204.866     High  
cufflinks 0.395     Low  
cufflinks 154.378     High  
cufflinks 0.148     Low Low

0 Strain