Gene : AGK2 A. thaliana TAIR10
Primary Identifier:  ? AT3G57550 Defline:  (1 of 1) PTHR23117//PTHR23117:SF13 - GUANYLATE KINASE-RELATED // GUANYLATE KINASE
Genomic Order:  4809 Name:  ? AT3G57550
Secondary Identifier:  ? PAC:19663724
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Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-7221 Arabidopsis thaliana pathologic  
Athaliana PWY-7228 Arabidopsis thaliana pathologic  
Athaliana PWY-841 Arabidopsis thaliana pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G57550 0.5kb upstream 0.5kb upstream 3242 true Chr3: 21306223-21309464 Arabidopsis thaliana
AT3G57550 0.5kb upstream 0.5kb upstream 500 false Chr3: 21306223-21306722 Arabidopsis thaliana
AT3G57550 0.5kb downstream 0.5kb downstream 3242 true Chr3: 21306723-21309964 Arabidopsis thaliana
AT3G57550 0.5kb downstream 0.5kb downstream 500 false Chr3: 21309465-21309964 Arabidopsis thaliana
AT3G57550 1.0kb upstream 1.0kb upstream 3742 true Chr3: 21305723-21309464 Arabidopsis thaliana
AT3G57550 1.0kb upstream 1.0kb upstream 1000 false Chr3: 21305723-21306722 Arabidopsis thaliana
AT3G57550 1.0kb downstream 1.0kb downstream 3742 true Chr3: 21306723-21310464 Arabidopsis thaliana
AT3G57550 1.0kb downstream 1.0kb downstream 1000 false Chr3: 21309465-21310464 Arabidopsis thaliana
AT3G57550 2.0kb upstream 2.0kb upstream 4742 true Chr3: 21304723-21309464 Arabidopsis thaliana
AT3G57550 2.0kb upstream 2.0kb upstream 2000 false Chr3: 21304723-21306722 Arabidopsis thaliana
AT3G57550 2.0kb downstream 2.0kb downstream 4742 true Chr3: 21306723-21311464 Arabidopsis thaliana
AT3G57550 2.0kb downstream 2.0kb downstream 2000 false Chr3: 21309465-21311464 Arabidopsis thaliana
AT3G57550 5.0kb upstream 5.0kb upstream 7742 true Chr3: 21301723-21309464 Arabidopsis thaliana
AT3G57550 5.0kb upstream 5.0kb upstream 5000 false Chr3: 21301723-21306722 Arabidopsis thaliana
AT3G57550 5.0kb downstream 5.0kb downstream 7742 true Chr3: 21306723-21314464 Arabidopsis thaliana
AT3G57550 5.0kb downstream 5.0kb downstream 5000 false Chr3: 21309465-21314464 Arabidopsis thaliana
AT3G57550 10.0kb upstream 10.0kb upstream 12742 true Chr3: 21296723-21309464 Arabidopsis thaliana
AT3G57550 10.0kb upstream 10.0kb upstream 10000 false Chr3: 21296723-21306722 Arabidopsis thaliana
AT3G57550 10.0kb downstream 10.0kb downstream 12742 true Chr3: 21306723-21319464 Arabidopsis thaliana
AT3G57550 10.0kb downstream 10.0kb downstream 10000 false Chr3: 21309465-21319464 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360638 5261 Brassicaceae View MSA
123839492 5264 Brassicales-Malvales View MSA
124336885 5266 SBM View MSA
124239524 5268 Malvidae View MSA
124064690 5270 Rosid View MSA
123747455 5271 Pentapetalae View MSA
122785650 5272 Eudicot View MSA
122047805 5273 Angiosperm View MSA
121349618 5274 Embryophyte View MSA
123427416 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.071       High
cufflinks 10.199        
cufflinks 7.998       Low
cufflinks 11.335        
cufflinks 10.744        
cufflinks 12.368        

0 Strain