Gene : AT3G01270 A. thaliana TAIR10
Defline:  (1 of 4) PTHR31683//PTHR31683:SF7 - FAMILY NOT NAMED // PECTATE LYASE 19-RELATED Genomic Order:  30
Name:  ? AT3G01270 Secondary Identifier:  ? PAC:19658934
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G01270 0.5kb upstream 0.5kb upstream 2713 true Chr3: 82685-85397 Arabidopsis thaliana
AT3G01270 0.5kb upstream 0.5kb upstream 500 false Chr3: 84898-85397 Arabidopsis thaliana
AT3G01270 0.5kb downstream 0.5kb downstream 2713 true Chr3: 82185-84897 Arabidopsis thaliana
AT3G01270 0.5kb downstream 0.5kb downstream 500 false Chr3: 82185-82684 Arabidopsis thaliana
AT3G01270 1.0kb upstream 1.0kb upstream 3213 true Chr3: 82685-85897 Arabidopsis thaliana
AT3G01270 1.0kb upstream 1.0kb upstream 1000 false Chr3: 84898-85897 Arabidopsis thaliana
AT3G01270 1.0kb downstream 1.0kb downstream 3213 true Chr3: 81685-84897 Arabidopsis thaliana
AT3G01270 1.0kb downstream 1.0kb downstream 1000 false Chr3: 81685-82684 Arabidopsis thaliana
AT3G01270 2.0kb upstream 2.0kb upstream 4213 true Chr3: 82685-86897 Arabidopsis thaliana
AT3G01270 2.0kb upstream 2.0kb upstream 2000 false Chr3: 84898-86897 Arabidopsis thaliana
AT3G01270 2.0kb downstream 2.0kb downstream 4213 true Chr3: 80685-84897 Arabidopsis thaliana
AT3G01270 2.0kb downstream 2.0kb downstream 2000 false Chr3: 80685-82684 Arabidopsis thaliana
AT3G01270 5.0kb upstream 5.0kb upstream 7213 true Chr3: 82685-89897 Arabidopsis thaliana
AT3G01270 5.0kb upstream 5.0kb upstream 5000 false Chr3: 84898-89897 Arabidopsis thaliana
AT3G01270 5.0kb downstream 5.0kb downstream 7213 true Chr3: 77685-84897 Arabidopsis thaliana
AT3G01270 5.0kb downstream 5.0kb downstream 5000 false Chr3: 77685-82684 Arabidopsis thaliana
AT3G01270 10.0kb upstream 10.0kb upstream 12213 true Chr3: 82685-94897 Arabidopsis thaliana
AT3G01270 10.0kb upstream 10.0kb upstream 10000 false Chr3: 84898-94897 Arabidopsis thaliana
AT3G01270 10.0kb downstream 10.0kb downstream 12213 true Chr3: 72685-84897 Arabidopsis thaliana
AT3G01270 10.0kb downstream 10.0kb downstream 10000 false Chr3: 72685-82684 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374043 5261 Brassicaceae View MSA
123838206 5264 Brassicales-Malvales View MSA
124350404 5266 SBM View MSA
124247401 5268 Malvidae View MSA
124069296 5270 Rosid View MSA
123749712 5271 Pentapetalae View MSA
122796488 5272 Eudicot View MSA
122048773 5273 Angiosperm View MSA
121311104 5274 Embryophyte View MSA
123348449 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.007     Low  
cufflinks 0.008     Low  
cufflinks 0.007     Low  
cufflinks 0.02     Low High
cufflinks 0.0     Not Expressed Not Expressed

0 Strain