Gene : scpl16 A. thaliana TAIR10
Primary Identifier:  ? AT3G12220 Defline:  (1 of 16) 2.3.1.103 - Sinapoylglucose--sinapoylglucose O-sinapoyltransferase
Genomic Order:  1203 Name:  ? AT3G12220
Secondary Identifier:  ? PAC:19661317
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-3301 Arabidopsis thaliana pathologic  

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G12220 0.5kb upstream 0.5kb upstream 2989 true Chr3: 3896531-3899519 Arabidopsis thaliana
AT3G12220 0.5kb upstream 0.5kb upstream 500 false Chr3: 3899020-3899519 Arabidopsis thaliana
AT3G12220 0.5kb downstream 0.5kb downstream 2989 true Chr3: 3896031-3899019 Arabidopsis thaliana
AT3G12220 0.5kb downstream 0.5kb downstream 500 false Chr3: 3896031-3896530 Arabidopsis thaliana
AT3G12220 1.0kb upstream 1.0kb upstream 3489 true Chr3: 3896531-3900019 Arabidopsis thaliana
AT3G12220 1.0kb upstream 1.0kb upstream 1000 false Chr3: 3899020-3900019 Arabidopsis thaliana
AT3G12220 1.0kb downstream 1.0kb downstream 3489 true Chr3: 3895531-3899019 Arabidopsis thaliana
AT3G12220 1.0kb downstream 1.0kb downstream 1000 false Chr3: 3895531-3896530 Arabidopsis thaliana
AT3G12220 2.0kb upstream 2.0kb upstream 4489 true Chr3: 3896531-3901019 Arabidopsis thaliana
AT3G12220 2.0kb upstream 2.0kb upstream 2000 false Chr3: 3899020-3901019 Arabidopsis thaliana
AT3G12220 2.0kb downstream 2.0kb downstream 4489 true Chr3: 3894531-3899019 Arabidopsis thaliana
AT3G12220 2.0kb downstream 2.0kb downstream 2000 false Chr3: 3894531-3896530 Arabidopsis thaliana
AT3G12220 5.0kb upstream 5.0kb upstream 7489 true Chr3: 3896531-3904019 Arabidopsis thaliana
AT3G12220 5.0kb upstream 5.0kb upstream 5000 false Chr3: 3899020-3904019 Arabidopsis thaliana
AT3G12220 5.0kb downstream 5.0kb downstream 7489 true Chr3: 3891531-3899019 Arabidopsis thaliana
AT3G12220 5.0kb downstream 5.0kb downstream 5000 false Chr3: 3891531-3896530 Arabidopsis thaliana
AT3G12220 10.0kb upstream 10.0kb upstream 12489 true Chr3: 3896531-3909019 Arabidopsis thaliana
AT3G12220 10.0kb upstream 10.0kb upstream 10000 false Chr3: 3899020-3909019 Arabidopsis thaliana
AT3G12220 10.0kb downstream 10.0kb downstream 12489 true Chr3: 3886531-3899019 Arabidopsis thaliana
AT3G12220 10.0kb downstream 10.0kb downstream 10000 false Chr3: 3886531-3896530 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366826 5261 Brassicaceae View MSA
123799251 5264 Brassicales-Malvales View MSA
124296796 5266 SBM View MSA
124254219 5268 Malvidae View MSA
124073941 5270 Rosid View MSA
123747460 5271 Pentapetalae View MSA
122796815 5272 Eudicot View MSA
122050629 5273 Angiosperm View MSA
121312037 5274 Embryophyte View MSA
123349249 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.509       High
cufflinks 0.965       Low
cufflinks 0.899       Low
cufflinks 2.769        
cufflinks 2.136        
cufflinks 2.999        

0 Strain