Gene : AT3G18280 A. thaliana TAIR10
Defline:  (1 of 67) PF14368 - Probable lipid transfer (LTP_2) Genomic Order:  1888
Name:  ? AT3G18280 Secondary Identifier:  ? PAC:19661031
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G18280 0.5kb upstream 0.5kb upstream 1095 true Chr3: 6266549-6267643 Arabidopsis thaliana
AT3G18280 0.5kb upstream 0.5kb upstream 500 false Chr3: 6266549-6267048 Arabidopsis thaliana
AT3G18280 0.5kb downstream 0.5kb downstream 1095 true Chr3: 6267049-6268143 Arabidopsis thaliana
AT3G18280 0.5kb downstream 0.5kb downstream 500 false Chr3: 6267644-6268143 Arabidopsis thaliana
AT3G18280 1.0kb upstream 1.0kb upstream 1595 true Chr3: 6266049-6267643 Arabidopsis thaliana
AT3G18280 1.0kb upstream 1.0kb upstream 1000 false Chr3: 6266049-6267048 Arabidopsis thaliana
AT3G18280 1.0kb downstream 1.0kb downstream 1595 true Chr3: 6267049-6268643 Arabidopsis thaliana
AT3G18280 1.0kb downstream 1.0kb downstream 1000 false Chr3: 6267644-6268643 Arabidopsis thaliana
AT3G18280 2.0kb upstream 2.0kb upstream 2595 true Chr3: 6265049-6267643 Arabidopsis thaliana
AT3G18280 2.0kb upstream 2.0kb upstream 2000 false Chr3: 6265049-6267048 Arabidopsis thaliana
AT3G18280 2.0kb downstream 2.0kb downstream 2595 true Chr3: 6267049-6269643 Arabidopsis thaliana
AT3G18280 2.0kb downstream 2.0kb downstream 2000 false Chr3: 6267644-6269643 Arabidopsis thaliana
AT3G18280 5.0kb upstream 5.0kb upstream 5595 true Chr3: 6262049-6267643 Arabidopsis thaliana
AT3G18280 5.0kb upstream 5.0kb upstream 5000 false Chr3: 6262049-6267048 Arabidopsis thaliana
AT3G18280 5.0kb downstream 5.0kb downstream 5595 true Chr3: 6267049-6272643 Arabidopsis thaliana
AT3G18280 5.0kb downstream 5.0kb downstream 5000 false Chr3: 6267644-6272643 Arabidopsis thaliana
AT3G18280 10.0kb upstream 10.0kb upstream 10595 true Chr3: 6257049-6267643 Arabidopsis thaliana
AT3G18280 10.0kb upstream 10.0kb upstream 10000 false Chr3: 6257049-6267048 Arabidopsis thaliana
AT3G18280 10.0kb downstream 10.0kb downstream 10595 true Chr3: 6267049-6277643 Arabidopsis thaliana
AT3G18280 10.0kb downstream 10.0kb downstream 10000 false Chr3: 6267644-6277643 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370017 5261 Brassicaceae View MSA
123839110 5264 Brassicales-Malvales View MSA
124350996 5266 SBM View MSA
124250916 5268 Malvidae View MSA
124071320 5270 Rosid View MSA
123749514 5271 Pentapetalae View MSA
122786269 5272 Eudicot View MSA
122049999 5273 Angiosperm View MSA
121351204 5274 Embryophyte View MSA
123382050 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.889        
cufflinks 188.631     High  
cufflinks 27.97     High  
cufflinks 188.828     High  
cufflinks 21.074        
cufflinks 212.035     High  

0 Strain