Gene : AT3G52960 A. thaliana TAIR10
Defline:  (1 of 1) PTHR10430//PTHR10430:SF16 - PEROXIREDOXIN // PEROXIREDOXIN-5, MITOCHONDRIAL Genomic Order:  4325
Name:  ? AT3G52960 Secondary Identifier:  ? PAC:19659150
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G52960 0.5kb upstream 0.5kb upstream 1452 true Chr3: 19639168-19640619 Arabidopsis thaliana
AT3G52960 0.5kb upstream 0.5kb upstream 500 false Chr3: 19639168-19639667 Arabidopsis thaliana
AT3G52960 0.5kb downstream 0.5kb downstream 1452 true Chr3: 19639668-19641119 Arabidopsis thaliana
AT3G52960 0.5kb downstream 0.5kb downstream 500 false Chr3: 19640620-19641119 Arabidopsis thaliana
AT3G52960 1.0kb upstream 1.0kb upstream 1952 true Chr3: 19638668-19640619 Arabidopsis thaliana
AT3G52960 1.0kb upstream 1.0kb upstream 1000 false Chr3: 19638668-19639667 Arabidopsis thaliana
AT3G52960 1.0kb downstream 1.0kb downstream 1952 true Chr3: 19639668-19641619 Arabidopsis thaliana
AT3G52960 1.0kb downstream 1.0kb downstream 1000 false Chr3: 19640620-19641619 Arabidopsis thaliana
AT3G52960 2.0kb upstream 2.0kb upstream 2952 true Chr3: 19637668-19640619 Arabidopsis thaliana
AT3G52960 2.0kb upstream 2.0kb upstream 2000 false Chr3: 19637668-19639667 Arabidopsis thaliana
AT3G52960 2.0kb downstream 2.0kb downstream 2952 true Chr3: 19639668-19642619 Arabidopsis thaliana
AT3G52960 2.0kb downstream 2.0kb downstream 2000 false Chr3: 19640620-19642619 Arabidopsis thaliana
AT3G52960 5.0kb upstream 5.0kb upstream 5952 true Chr3: 19634668-19640619 Arabidopsis thaliana
AT3G52960 5.0kb upstream 5.0kb upstream 5000 false Chr3: 19634668-19639667 Arabidopsis thaliana
AT3G52960 5.0kb downstream 5.0kb downstream 5952 true Chr3: 19639668-19645619 Arabidopsis thaliana
AT3G52960 5.0kb downstream 5.0kb downstream 5000 false Chr3: 19640620-19645619 Arabidopsis thaliana
AT3G52960 10.0kb upstream 10.0kb upstream 10952 true Chr3: 19629668-19640619 Arabidopsis thaliana
AT3G52960 10.0kb upstream 10.0kb upstream 10000 false Chr3: 19629668-19639667 Arabidopsis thaliana
AT3G52960 10.0kb downstream 10.0kb downstream 10952 true Chr3: 19639668-19650619 Arabidopsis thaliana
AT3G52960 10.0kb downstream 10.0kb downstream 10000 false Chr3: 19640620-19650619 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378307 5261 Brassicaceae View MSA
123830473 5264 Brassicales-Malvales View MSA
124336737 5266 SBM View MSA
124237481 5268 Malvidae View MSA
124061104 5270 Rosid View MSA
123743941 5271 Pentapetalae View MSA
122794597 5272 Eudicot View MSA
122042116 5273 Angiosperm View MSA
121349933 5274 Embryophyte View MSA
123427314 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 153.168     High  
cufflinks 27.551       Low
cufflinks 224.648     High High
cufflinks 33.845     High  
cufflinks 150.074     High  
cufflinks 40.906     High  

0 Strain