Gene : CRR2 A. thaliana TAIR10
Primary Identifier:  ? AT3G46790 Defline:  (1 of 10) PF01535//PF13041//PF13812//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) // DYW family of nucleic acid deaminases (DYW_deaminase)
Genomic Order:  3666 Name:  ? AT3G46790
Secondary Identifier:  ? PAC:19658403
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0 Pathways

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G46790 0.5kb upstream 0.5kb upstream 2730 true Chr3: 17231773-17234502 Arabidopsis thaliana
AT3G46790 0.5kb upstream 0.5kb upstream 500 false Chr3: 17234003-17234502 Arabidopsis thaliana
AT3G46790 0.5kb downstream 0.5kb downstream 2730 true Chr3: 17231273-17234002 Arabidopsis thaliana
AT3G46790 0.5kb downstream 0.5kb downstream 500 false Chr3: 17231273-17231772 Arabidopsis thaliana
AT3G46790 1.0kb upstream 1.0kb upstream 3230 true Chr3: 17231773-17235002 Arabidopsis thaliana
AT3G46790 1.0kb upstream 1.0kb upstream 1000 false Chr3: 17234003-17235002 Arabidopsis thaliana
AT3G46790 1.0kb downstream 1.0kb downstream 3230 true Chr3: 17230773-17234002 Arabidopsis thaliana
AT3G46790 1.0kb downstream 1.0kb downstream 1000 false Chr3: 17230773-17231772 Arabidopsis thaliana
AT3G46790 2.0kb upstream 2.0kb upstream 4230 true Chr3: 17231773-17236002 Arabidopsis thaliana
AT3G46790 2.0kb upstream 2.0kb upstream 2000 false Chr3: 17234003-17236002 Arabidopsis thaliana
AT3G46790 2.0kb downstream 2.0kb downstream 4230 true Chr3: 17229773-17234002 Arabidopsis thaliana
AT3G46790 2.0kb downstream 2.0kb downstream 2000 false Chr3: 17229773-17231772 Arabidopsis thaliana
AT3G46790 5.0kb upstream 5.0kb upstream 7230 true Chr3: 17231773-17239002 Arabidopsis thaliana
AT3G46790 5.0kb upstream 5.0kb upstream 5000 false Chr3: 17234003-17239002 Arabidopsis thaliana
AT3G46790 5.0kb downstream 5.0kb downstream 7230 true Chr3: 17226773-17234002 Arabidopsis thaliana
AT3G46790 5.0kb downstream 5.0kb downstream 5000 false Chr3: 17226773-17231772 Arabidopsis thaliana
AT3G46790 10.0kb upstream 10.0kb upstream 12230 true Chr3: 17231773-17244002 Arabidopsis thaliana
AT3G46790 10.0kb upstream 10.0kb upstream 10000 false Chr3: 17234003-17244002 Arabidopsis thaliana
AT3G46790 10.0kb downstream 10.0kb downstream 12230 true Chr3: 17221773-17234002 Arabidopsis thaliana
AT3G46790 10.0kb downstream 10.0kb downstream 10000 false Chr3: 17221773-17231772 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027491 5273 Angiosperm View MSA
122363885 5261 Brassicaceae View MSA
123831367 5264 Brassicales-Malvales View MSA
124345335 5266 SBM View MSA
124239641 5268 Malvidae View MSA
124062033 5270 Rosid View MSA
123753025 5271 Pentapetalae View MSA
122794671 5272 Eudicot View MSA
121352423 5274 Embryophyte View MSA
123382766 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.551       High
cufflinks 4.462       Low
cufflinks 6.522        
cufflinks 5.047        
cufflinks 5.542        
cufflinks 4.683        

0 Strain