Gene : PEN3 A. thaliana TAIR10
Primary Identifier:  ? AT3G50110 Defline:  (1 of 3) 3.1.3.67 - Phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase / Phosphatidylinositol-3,4,5-trisphosphate 3-phosphohydrolase
Genomic Order:  4017 Name:  ? AT3G50110
Secondary Identifier:  ? PAC:19662887
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-6368 Arabidopsis thaliana pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G50110 0.5kb upstream 0.5kb upstream 4427 true Chr3: 18580609-18585035 Arabidopsis thaliana
AT3G50110 0.5kb upstream 0.5kb upstream 500 false Chr3: 18584536-18585035 Arabidopsis thaliana
AT3G50110 0.5kb downstream 0.5kb downstream 4427 true Chr3: 18580109-18584535 Arabidopsis thaliana
AT3G50110 0.5kb downstream 0.5kb downstream 500 false Chr3: 18580109-18580608 Arabidopsis thaliana
AT3G50110 1.0kb upstream 1.0kb upstream 4927 true Chr3: 18580609-18585535 Arabidopsis thaliana
AT3G50110 1.0kb upstream 1.0kb upstream 1000 false Chr3: 18584536-18585535 Arabidopsis thaliana
AT3G50110 1.0kb downstream 1.0kb downstream 4927 true Chr3: 18579609-18584535 Arabidopsis thaliana
AT3G50110 1.0kb downstream 1.0kb downstream 1000 false Chr3: 18579609-18580608 Arabidopsis thaliana
AT3G50110 2.0kb upstream 2.0kb upstream 5927 true Chr3: 18580609-18586535 Arabidopsis thaliana
AT3G50110 2.0kb upstream 2.0kb upstream 2000 false Chr3: 18584536-18586535 Arabidopsis thaliana
AT3G50110 2.0kb downstream 2.0kb downstream 5927 true Chr3: 18578609-18584535 Arabidopsis thaliana
AT3G50110 2.0kb downstream 2.0kb downstream 2000 false Chr3: 18578609-18580608 Arabidopsis thaliana
AT3G50110 5.0kb upstream 5.0kb upstream 8927 true Chr3: 18580609-18589535 Arabidopsis thaliana
AT3G50110 5.0kb upstream 5.0kb upstream 5000 false Chr3: 18584536-18589535 Arabidopsis thaliana
AT3G50110 5.0kb downstream 5.0kb downstream 8927 true Chr3: 18575609-18584535 Arabidopsis thaliana
AT3G50110 5.0kb downstream 5.0kb downstream 5000 false Chr3: 18575609-18580608 Arabidopsis thaliana
AT3G50110 10.0kb upstream 10.0kb upstream 13927 true Chr3: 18580609-18594535 Arabidopsis thaliana
AT3G50110 10.0kb upstream 10.0kb upstream 10000 false Chr3: 18584536-18594535 Arabidopsis thaliana
AT3G50110 10.0kb downstream 10.0kb downstream 13927 true Chr3: 18570609-18584535 Arabidopsis thaliana
AT3G50110 10.0kb downstream 10.0kb downstream 10000 false Chr3: 18570609-18580608 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121510182 5273 Angiosperm View MSA
122360235 5261 Brassicaceae View MSA
123797917 5264 Brassicales-Malvales View MSA
124295616 5266 SBM View MSA
124148005 5268 Malvidae View MSA
123874094 5270 Rosid View MSA
123458118 5271 Pentapetalae View MSA
122493529 5272 Eudicot View MSA
120783293 5274 Embryophyte View MSA
122825321 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.948        
cufflinks 2.02        
cufflinks 1.651        
cufflinks 2.188        
cufflinks 1.471       Low
cufflinks 2.458       High

0 Strain