Gene : AT3G59350 A. thaliana TAIR10
Defline:  (1 of 8) K13436 - pto-interacting protein 1 (PTI1) Genomic Order:  4992
Name:  ? AT3G59350 Secondary Identifier:  ? PAC:19664164
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G59350 0.5kb upstream 0.5kb upstream 3168 true Chr3: 21932025-21935192 Arabidopsis thaliana
AT3G59350 0.5kb upstream 0.5kb upstream 500 false Chr3: 21932025-21932524 Arabidopsis thaliana
AT3G59350 0.5kb downstream 0.5kb downstream 3168 true Chr3: 21932525-21935692 Arabidopsis thaliana
AT3G59350 0.5kb downstream 0.5kb downstream 500 false Chr3: 21935193-21935692 Arabidopsis thaliana
AT3G59350 1.0kb upstream 1.0kb upstream 3668 true Chr3: 21931525-21935192 Arabidopsis thaliana
AT3G59350 1.0kb upstream 1.0kb upstream 1000 false Chr3: 21931525-21932524 Arabidopsis thaliana
AT3G59350 1.0kb downstream 1.0kb downstream 3668 true Chr3: 21932525-21936192 Arabidopsis thaliana
AT3G59350 1.0kb downstream 1.0kb downstream 1000 false Chr3: 21935193-21936192 Arabidopsis thaliana
AT3G59350 2.0kb upstream 2.0kb upstream 4668 true Chr3: 21930525-21935192 Arabidopsis thaliana
AT3G59350 2.0kb upstream 2.0kb upstream 2000 false Chr3: 21930525-21932524 Arabidopsis thaliana
AT3G59350 2.0kb downstream 2.0kb downstream 4668 true Chr3: 21932525-21937192 Arabidopsis thaliana
AT3G59350 2.0kb downstream 2.0kb downstream 2000 false Chr3: 21935193-21937192 Arabidopsis thaliana
AT3G59350 5.0kb upstream 5.0kb upstream 7668 true Chr3: 21927525-21935192 Arabidopsis thaliana
AT3G59350 5.0kb upstream 5.0kb upstream 5000 false Chr3: 21927525-21932524 Arabidopsis thaliana
AT3G59350 5.0kb downstream 5.0kb downstream 7668 true Chr3: 21932525-21940192 Arabidopsis thaliana
AT3G59350 5.0kb downstream 5.0kb downstream 5000 false Chr3: 21935193-21940192 Arabidopsis thaliana
AT3G59350 10.0kb upstream 10.0kb upstream 12668 true Chr3: 21922525-21935192 Arabidopsis thaliana
AT3G59350 10.0kb upstream 10.0kb upstream 10000 false Chr3: 21922525-21932524 Arabidopsis thaliana
AT3G59350 10.0kb downstream 10.0kb downstream 12668 true Chr3: 21932525-21945192 Arabidopsis thaliana
AT3G59350 10.0kb downstream 10.0kb downstream 10000 false Chr3: 21935193-21945192 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363334 5261 Brassicaceae View MSA
123836888 5264 Brassicales-Malvales View MSA
124350073 5266 SBM View MSA
124253132 5268 Malvidae View MSA
124060437 5270 Rosid View MSA
123746986 5271 Pentapetalae View MSA
122791632 5272 Eudicot View MSA
122044012 5273 Angiosperm View MSA
121347180 5274 Embryophyte View MSA
123380505 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 24.45        
cufflinks 56.229     High High
cufflinks 27.477     High  
cufflinks 29.05        
cufflinks 24.994        
cufflinks 39.251     High  

0 Strain